# HG changeset patch
# User iuc
# Date 1527203285 14400
# Node ID e54eff8a4c3d01697587a0452ec3e1562d22e640
# Parent  abd0775e221f9dab8d38a81a31a9aca2cd0fd19b
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 23fab16cd40acbd5b0e9d640ed3858040db7a622

diff -r abd0775e221f -r e54eff8a4c3d crossmap_gff.xml
--- a/crossmap_gff.xml	Fri Oct 20 11:32:09 2017 -0400
+++ b/crossmap_gff.xml	Thu May 24 19:08:05 2018 -0400
@@ -1,4 +1,4 @@
-<tool id="crossmap_gff" name="CrossMap GFF" version="@WRAPPER_VERSION@-0">
+<tool id="crossmap_gff" name="CrossMap GFF" version="@WRAPPER_VERSION@">
     <description>Convert genome coordinates or annotation files between genome assemblies</description>
     <macros>
         <import>macros.xml</import>
@@ -16,7 +16,7 @@
     >
 #end if
 
-'${output}'
+output
     ]]></command>
 
     <inputs>
@@ -28,7 +28,7 @@
     </inputs>
 
     <outputs>
-        <data name="output" format="gff" label="${tool.name} on ${on_string}" />
+        <data name="output" format="gff" label="${tool.name} on ${on_string}" from_work_dir="output" />
     </outputs>
 
     <tests>
@@ -74,7 +74,6 @@
   independently, and we do NOT check if features originally belonging to
   the same gene were converted into the same gene.
 - If user want to liftover gene annotation files, use BED12 format.
-
     ]]></help>
 
     <citations>
diff -r abd0775e221f -r e54eff8a4c3d macros.xml
--- a/macros.xml	Fri Oct 20 11:32:09 2017 -0400
+++ b/macros.xml	Thu May 24 19:08:05 2018 -0400
@@ -2,11 +2,11 @@
 <macros>
     <xml name="requirements">
         <requirements>
-            <requirement type="package" version="0.2.5">crossmap</requirement>
+            <requirement type="package" version="0.2.7">crossmap</requirement>
             <yield/>
         </requirements>
     </xml>
-    <token name="@WRAPPER_VERSION@">0.2.5</token>
+    <token name="@WRAPPER_VERSION@">0.2.7</token>
     <xml name="stdio">
         <stdio>
             <regex match="Aborted (core dumped)" source="stdout" level="fatal"/>