Mercurial > repos > iuc > crossmap_bed

annotate README.rst @ 9:aa85f6cf1d16 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit e10d34b547557b2bd4f0be69e31204bd5703e422"
author iuc
date Thu, 20 Jan 2022 04:27:28 +0000
parents 235ab3277db1
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff changeset
1 CrossMap wrapper for Galaxy
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff changeset
2 ===========================
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff changeset
3
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff changeset
4 CrossMap is versatile tool to convert genome coordinates or annotation files between genome
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff changeset
5 assemblies. It supports mostly commonly used file types, including BAM, BED,BigWig, GFF,
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff changeset
6 GTF, SAM, Wiggle, and VCF formats. For large plain text file types, such as BED, GFF, GTF
235ab3277db1 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff changeset
7 and VCF, reading from remote servers and file compression are supported.