Mercurial > repos > iuc > crossmap_bed
annotate README.rst @ 6:541a0c136ad8 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 95fe80d08fb14c4c344da4979290e72261e31ae5"
| author | iuc |
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| date | Thu, 10 Oct 2019 04:03:08 -0400 |
| parents | 235ab3277db1 |
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| rev | line source |
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235ab3277db1
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
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1 CrossMap wrapper for Galaxy |
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235ab3277db1
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff
changeset
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2 =========================== |
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235ab3277db1
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff
changeset
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3 |
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235ab3277db1
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff
changeset
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4 CrossMap is versatile tool to convert genome coordinates or annotation files between genome |
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235ab3277db1
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff
changeset
|
5 assemblies. It supports mostly commonly used file types, including BAM, BED,BigWig, GFF, |
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235ab3277db1
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff
changeset
|
6 GTF, SAM, Wiggle, and VCF formats. For large plain text file types, such as BED, GFF, GTF |
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235ab3277db1
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit 8564863eaad7bb9f9c8c273d471511979a2c96aa
iuc
parents:
diff
changeset
|
7 and VCF, reading from remote servers and file compression are supported. |
