Mercurial > repos > iuc > crossmap_bam

comparison crossmap_bam.xml @ 9:c413cbb69f3c draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/crossmap commit b450d8cda28c53ee5dbd4bc2582a589f44bf6fea"
author iuc
date Wed, 24 Nov 2021 21:56:43 +0000
parents acd53aae2d46
children 8f5580caf79b
comparison
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8:acd53aae2d46 9:c413cbb69f3c
42 <tests> 42 <tests>
43 <test> 43 <test>
44 <param name="index_source" value="history"/> 44 <param name="index_source" value="history"/>
45 <param name="input" value="test_bam_01_input_a.bam" ftype="bam"/> 45 <param name="input" value="test_bam_01_input_a.bam" ftype="bam"/>
46 <param name="input_chain" value="aToB.over.chain" ftype="csv"/> 46 <param name="input_chain" value="aToB.over.chain" ftype="csv"/>
47 <param name="include_fails" value="False"/>
48
49 <output name="output" file="test_bam_01_output_a.bam" ftype="bam" lines_diff="4" /> 47 <output name="output" file="test_bam_01_output_a.bam" ftype="bam" lines_diff="4" />
50 </test> 48 </test>
51 <test> 49 <test>
52 <param name="index_source" value="cached"/> 50 <param name="index_source" value="cached"/>
53
54 <param name="input" value="test_bam_01_input_a.bam" ftype="bam" dbkey="hg18"/> 51 <param name="input" value="test_bam_01_input_a.bam" ftype="bam" dbkey="hg18"/>
55 <param name="include_fails" value="False"/>
56
57 <output name="output" file="test_bam_01_output_a.bam" ftype="bam" lines_diff="4" /> 52 <output name="output" file="test_bam_01_output_a.bam" ftype="bam" lines_diff="4" />
58 </test> 53 </test>
59 </tests> 54 </tests>
60 <help><![CDATA[ 55 <help><![CDATA[
61 @HELP_GENERAL@ 56 @HELP_GENERAL@