Mercurial > repos > iuc > coreprofiler_allele_calling

comparison coreprofiler_allele_calling.xml @ 6:2b8a05bf028b draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/coreprofiler commit adc61f2c22d06e320a8a3776d5255f14ddd94e78
author iuc
date Thu, 08 Jan 2026 10:29:52 +0000
parents 2cce87fd19ff
children
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5:2cce87fd19ff 6:2b8a05bf028b
61 61
62 ]]></command> 62 ]]></command>
63 <inputs> 63 <inputs>
64 <param name="input_file" type="data" format="fasta,fasta.gz" multiple="true" label="Genome assemblies in FASTA/FASTA.GZ format" help="Provide one or more genome assembly files in FASTA/FASTA.GZ format." /> 64 <param name="input_file" type="data" format="fasta,fasta.gz" multiple="true" label="Genome assemblies in FASTA/FASTA.GZ format" help="Provide one or more genome assembly files in FASTA/FASTA.GZ format." />
65 <param name="input_scheme" type="select" label="Reference allele scheme" help="Select a pre-installed reference allele scheme. If the desired scheme is not listed, please contact your Galaxy administrator."> 65 <param name="input_scheme" type="select" label="Reference allele scheme" help="Select a pre-installed reference allele scheme. If the desired scheme is not listed, please contact your Galaxy administrator.">
66 <options from_data_table="coreprofiler_scheme"> 66 <options from_data_table="coreprofiler_versioned_scheme">
67 <validator message="No reference allele scheme is available" type="no_options" /> 67 <validator message="No reference allele scheme is available" type="no_options" />
68 </options> 68 </options>
69 </param> 69 </param>
70 <section name="autotag_section" title="Autotag Parameters" expanded="true"> 70 <section name="autotag_section" title="Autotag Parameters" expanded="true">
71 <param argument="--autotag_word_size" type="integer" label="Autotag Word Size" help="Word size for autotag BLASTn, defined as 'min length of the shortest allele - 1'. Default is 31." value="31" /> 71 <param argument="--autotag_word_size" type="integer" label="Autotag Word Size" help="Word size for autotag BLASTn, defined as 'min length of the shortest allele - 1'. Default is 31." value="31" />