Mercurial > repos > iuc > colibread_mapsembler2
diff mapsembler2.xml @ 6:e8a8cb93878a draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/colibread commit 747394d19e88a569a5154615e366ea0401c820dd
| author | iuc |
|---|---|
| date | Sat, 05 Oct 2024 19:52:52 +0000 |
| parents | 71d60a931e2f |
| children |
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--- a/mapsembler2.xml Thu May 06 12:42:40 2021 +0000 +++ b/mapsembler2.xml Sat Oct 05 19:52:52 2024 +0000 @@ -1,10 +1,11 @@ -<tool id="mapsembler2" name="Mapsembler2" version="2.2.4+galaxy0" profile="@PROFILE@"> +<tool id="mapsembler2" name="Mapsembler2" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@"> <description>is a targeted assembly software</description> <macros> + <token name="@TOOL_VERSION@">2.2.4</token> <import>macros.xml</import> </macros> <requirements> - <requirement type="package" version="2.2.4">mapsembler2</requirement> + <requirement type="package" version="@TOOL_VERSION@">mapsembler2</requirement> </requirements> <command><![CDATA[ #import re @@ -52,10 +53,10 @@ <param argument="-y" type="integer" label="Max depth of nodes" value="10000" help="Set the maximal depth of the graph"/> </inputs> <outputs> - <data name="fasta" from_work_dir="res_k_*.fasta" format="fasta" label="Assembly with ${tool.name} on $on_string"/> - <data name="coherent" from_work_dir="res_coherent_*.fasta" format="fasta" label="Coherent with ${tool.name} on $on_string" hidden="true"/> - <data name="uncoherent" from_work_dir="res_uncoherent_*.fasta" format="fasta" label="Uncoherent with ${tool.name} on $on_string" hidden="true"/> - <data name="extremities" from_work_dir="starter_extremities.fa" format="fasta" label="Starter extremities with ${tool.name} on $on_string" hidden="true"/> + <data name="fasta" from_work_dir="res_k_*.fasta" format="fasta" label="${tool.name} on ${on_string}: Assembly"/> + <data name="coherent" from_work_dir="res_coherent_*.fasta" format="fasta" label="${tool.name} on ${on_string}: Coherent" hidden="true"/> + <data name="uncoherent" from_work_dir="res_uncoherent_*.fasta" format="fasta" label="${tool.name} on ${on_string}: Uncoherent" hidden="true"/> + <data name="extremities" from_work_dir="starter_extremities.fa" format="fasta" label="${tool.name} on ${on_string}: Starter extremities" hidden="true"/> </outputs> <tests> <test>