Mercurial > repos > iuc > colibread_mapsembler2

comparison test-data/discosnp/multifasta.fa @ 4:21f081b808ff draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/colibread commit 0ed02865f048ad7471ea79509c0e23162bc29166"
author iuc
date Fri, 14 Aug 2020 20:56:47 +0000
parents c90f5219b67a
children
comparison
equal deleted inserted replaced
3:2d9c707178e8 4:21f081b808ff
1 >SNP_higher_path_3|P_1:24_A/T|high|nb_pol_1|C1_74|C2_0|Q1_0|Q2_0|G1_0/0:8,227,1484|G2_1/1:1724,263,8|rank_1 1 >SNP_higher_path_3|P_1:24_A/T|high|nb_pol_1|left_unitig_length_92|right_unitig_length_55|C1_74|C2_0|Q1_0|Q2_0|G1_0/0:8,227,1484|G2_1/1:1724,263,8|rank_1
2 AGGGCCGGGCTACATGTTAACTACAAGGCTATAACCTATTGATGACCCG 2 tctctaccgcgctctgtggaagtgcacttgatcgttttgctgtagaaaaaacttaataaacagaatgccgatgaaggcactactgtactaatAGGGCCGGGCTACATGTTAACTACAAGGCTATAACCTATTGATGACCCGgtccatacataacttggtatcgtgcatgtagcgttcaagggctatagcaattccg
3 >SNP_lower_path_3|P_1:24_A/T|high|nb_pol_1|C1_0|C2_86|Q1_0|Q2_0|G1_0/0:8,227,1484|G2_1/1:1724,263,8|rank_1 3 >SNP_lower_path_3|P_1:24_A/T|high|nb_pol_1|left_unitig_length_92|right_unitig_length_55|C1_0|C2_86|Q1_0|Q2_0|G1_0/0:8,227,1484|G2_1/1:1724,263,8|rank_1
4 AGGGCCGGGCTACATGTTAACTACTAGGCTATAACCTATTGATGACCCG 4 tctctaccgcgctctgtggaagtgcacttgatcgttttgctgtagaaaaaacttaataaacagaatgccgatgaaggcactactgtactaatAGGGCCGGGCTACATGTTAACTACTAGGCTATAACCTATTGATGACCCGgtccatacataacttggtatcgtgcatgtagcgttcaagggctatagcaattccg
5 >SNP_higher_path_2|P_1:24_C/G|high|nb_pol_1|C1_0|C2_134|Q1_0|Q2_0|G1_1/1:2484,378,10|G2_0/0:10,408,2684|rank_1 5 >SNP_higher_path_2|P_1:24_C/G|high|nb_pol_1|left_unitig_length_267|right_unitig_length_92|C1_0|C2_134|Q1_0|Q2_0|G1_1/1:2484,378,10|G2_0/0:10,408,2684|rank_1
6 ATTACAGAGCTGCCGGGTGGATGACTCTCTACCGCGCTCTGTGGAAGTG 6 cttcgcagagaaaccgcacgtccagttctaacactctcatatgtgctcgtcgtttatgctttcggcgtgaaaactggtgcgccggtgtctggagaccatccttcttgcgtatgactccaaggacagccatcacggtttgtgggttcactgggactgtcacgcttaaccggacggaactcgagaaggcatacgactggtcgtaagaccgctctgatccgacaccaccataacgcggcactcatgattatcatcacttttttagtccctATTACAGAGCTGCCGGGTGGATGACTCTCTACCGCGCTCTGTGGAAGTGcacttgatcgttttgctgtagaaaaaacttaataaacagaatgccgatgaaggcactactgtactaatagggccgggctacatgttaactac
7 >SNP_lower_path_2|P_1:24_C/G|high|nb_pol_1|C1_124|C2_0|Q1_0|Q2_0|G1_1/1:2484,378,10|G2_0/0:10,408,2684|rank_1 7 >SNP_lower_path_2|P_1:24_C/G|high|nb_pol_1|left_unitig_length_267|right_unitig_length_92|C1_124|C2_0|Q1_0|Q2_0|G1_1/1:2484,378,10|G2_0/0:10,408,2684|rank_1
8 ATTACAGAGCTGCCGGGTGGATGAGTCTCTACCGCGCTCTGTGGAAGTG 8 cttcgcagagaaaccgcacgtccagttctaacactctcatatgtgctcgtcgtttatgctttcggcgtgaaaactggtgcgccggtgtctggagaccatccttcttgcgtatgactccaaggacagccatcacggtttgtgggttcactgggactgtcacgcttaaccggacggaactcgagaaggcatacgactggtcgtaagaccgctctgatccgacaccaccataacgcggcactcatgattatcatcacttttttagtccctATTACAGAGCTGCCGGGTGGATGAGTCTCTACCGCGCTCTGTGGAAGTGcacttgatcgttttgctgtagaaaaaacttaataaacagaatgccgatgaaggcactactgtactaatagggccgggctacatgttaactac
9 >SNP_higher_path_1|P_1:24_A/T|high|nb_pol_1|C1_0|C2_114|Q1_0|Q2_0|G1_1/1:2204,335,9|G2_0/0:9,347,2284|rank_1 9 >SNP_higher_path_1|P_1:24_A/T|high|nb_pol_1|left_unitig_length_475|right_unitig_length_267|C1_0|C2_114|Q1_0|Q2_0|G1_1/1:2204,335,9|G2_0/0:9,347,2284|rank_1
10 CAACAACGCAACAGCTCGAGGTGTACTTCGCAGAGAAACCGCACGTCCA 10 cggataccgttgagacatcttataagtagacgcaatgcggaatcttatagaatcgcccgatagcgttgtgttggtggacacggctgattaccctctcacccgcgctattagcttccataccacctgcggccatccattaagatccgctgctcctcacgaaaaaagaattaataagaagtcccgtaacatgcggatttggtagtcgttatagacaactttactggggcgaactaaaacgcttgtggacagaattttggcagtggcaattaatctctaatgatgtgatattagggtctaaaatgtaagaattcggtgagttagattggacaaggggatccgaagatgttttggcgcagttagtcacagggggagcccctgcctacaaaaagcgcttactgttgactgtctagggatacagcgaaagcggcagtcgttgaagcaaaagtgatatgtgcgacactgcatctaggcagcgCAACAACGCAACAGCTCGAGGTGTACTTCGCAGAGAAACCGCACGTCCAgttctaacactctcatatgtgctcgtcgtttatgctttcggcgtgaaaactggtgcgccggtgtctggagaccatccttcttgcgtatgactccaaggacagccatcacggtttgtgggttcactgggactgtcacgcttaaccggacggaactcgagaaggcatacgactggtcgtaagaccgctctgatccgacaccaccataacgcggcactcatgattatcatcacttttttagtccctattacagagctgccgggtggatga
11 >SNP_lower_path_1|P_1:24_A/T|high|nb_pol_1|C1_110|C2_0|Q1_0|Q2_0|G1_1/1:2204,335,9|G2_0/0:9,347,2284|rank_1 11 >SNP_lower_path_1|P_1:24_A/T|high|nb_pol_1|left_unitig_length_475|right_unitig_length_267|C1_110|C2_0|Q1_0|Q2_0|G1_1/1:2204,335,9|G2_0/0:9,347,2284|rank_1
12 CAACAACGCAACAGCTCGAGGTGTTCTTCGCAGAGAAACCGCACGTCCA 12 cggataccgttgagacatcttataagtagacgcaatgcggaatcttatagaatcgcccgatagcgttgtgttggtggacacggctgattaccctctcacccgcgctattagcttccataccacctgcggccatccattaagatccgctgctcctcacgaaaaaagaattaataagaagtcccgtaacatgcggatttggtagtcgttatagacaactttactggggcgaactaaaacgcttgtggacagaattttggcagtggcaattaatctctaatgatgtgatattagggtctaaaatgtaagaattcggtgagttagattggacaaggggatccgaagatgttttggcgcagttagtcacagggggagcccctgcctacaaaaagcgcttactgttgactgtctagggatacagcgaaagcggcagtcgttgaagcaaaagtgatatgtgcgacactgcatctaggcagcgCAACAACGCAACAGCTCGAGGTGTTCTTCGCAGAGAAACCGCACGTCCAgttctaacactctcatatgtgctcgtcgtttatgctttcggcgtgaaaactggtgcgccggtgtctggagaccatccttcttgcgtatgactccaaggacagccatcacggtttgtgggttcactgggactgtcacgcttaaccggacggaactcgagaaggcatacgactggtcgtaagaccgctctgatccgacaccaccataacgcggcactcatgattatcatcacttttttagtccctattacagagctgccgggtggatga