Mercurial > repos > iuc > colabfold_alphafold
comparison macros.xml @ 0:ebe3c2a58ee2 draft default tip
planemo upload for repository https://github.com/sokrypton/ColabFold commit b01085b7137b002268e0a8e4d75a5e03326638bb
| author | iuc |
|---|---|
| date | Wed, 21 Aug 2024 07:39:49 +0000 |
| parents | |
| children |
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| -1:000000000000 | 0:ebe3c2a58ee2 |
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| 1 <macros> | |
| 2 <token name="@VERSION@">1.5.5</token> | |
| 3 <token name="@CUDA_VERSION@">12.2.2</token> | |
| 4 <token name="@VERSION_SUFFIX@">1</token> | |
| 5 <xml name="requirements"> | |
| 6 <requirements> | |
| 7 <container type="docker">ghcr.io/sokrypton/colabfold:@VERSION@-cuda@CUDA_VERSION@</container> | |
| 8 </requirements> | |
| 9 </xml> | |
| 10 <xml name="biotools"> | |
| 11 <xrefs> | |
| 12 <xref type="bio.tools">Colabfold</xref> | |
| 13 </xrefs> | |
| 14 </xml> | |
| 15 <xml name="citations"> | |
| 16 <citations> | |
| 17 <citation type="doi">10.1038/s41592-022-01488-1</citation> | |
| 18 </citations> | |
| 19 </xml> | |
| 20 <xml name="db_selector"> | |
| 21 <conditional name="select_db"> | |
| 22 <param name="use_db" type="select" label="Manually set database?"> | |
| 23 <option value="yes">Yes</option> | |
| 24 <option value="no">No</option> | |
| 25 </param> | |
| 26 <when value="no"></when> | |
| 27 <when value="yes"> | |
| 28 <param name="msa_mode" label="MSA mode" type="select"> | |
| 29 <option value="mmseqs2_uniref_env">mmseqs2_uniref_env</option> | |
| 30 <option value="mmseqs2_uniref">mmseqs2_uniref</option> | |
| 31 <option value="single_sequence">Use single sequence input</option> | |
| 32 <!-- <option value="custom">custom</option> --> | |
| 33 </param> | |
| 34 </when> | |
| 35 </conditional> | |
| 36 </xml> | |
| 37 </macros> |
