diff simpletable.xml @ 4:04ec82208544 draft default tip

Uploaded
author iuc
date Mon, 06 Apr 2015 17:59:39 -0400
parents 6e5ac2173a43
children
line wrap: on
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--- a/simpletable.xml	Thu Mar 19 17:58:54 2015 -0400
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,53 +0,0 @@
-<tool id="circos_simpletable" name="Simple Table Plotter" version="@WRAPPER_VERSION@.0">
-    <description></description>
-    <macros>
-        <import>macros.xml</import>
-    </macros>
-    <expand macro="requirements" />
-    <expand macro="stdio" />
-    <command>
-<![CDATA[
-cat $input |
-    perl \${CIRCOSTOOLS}/tools/tableviewer/bin/parse-table |
-    perl \${CIRCOSTOOLS}/tools/tableviewer/bin/make-conf -dir data;
-
-cp -Rv \${CIRCOSTOOLS}/tools/tableviewer/etc .;
-mkdir img;
-circos -conf .;
-
-cp img/tableview.png $output_png;
-cp img/tableview.svg $output_svg;
-]]>
-    </command>
-    <inputs>
-        <param format="tabular" name="input" type="data" label="Data Table" />
-    </inputs>
-    <outputs>
-        <data format="svg" name="output_svg">
-        </data>
-        <data format="png" name="output_png">
-        </data>
-    </outputs>
-    <tests>
-    </tests>
-    <help>
-<![CDATA[
-**What it does**
-
-Very simple table plotter
-
-.. image:: $PATH_TO_IMAGES/tablevie.png
-
-.. class:: warningmark
-
-1. Your tabular data MUST have both a column and row header::
-
-    Data  A  B
-    A     4  2
-    B     0 -2
-
-@REFERENCES@
-]]>
-    </help>
-    <expand macro="citations" />
-</tool>