Mercurial > repos > iuc > circos

comparison macros_tests.xml @ 2:890ef899a3d7 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
author iuc
date Tue, 17 Sep 2019 16:54:24 -0400
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children b84d385679e2
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1:95664f8de269 2:890ef899a3d7
1 <?xml version="1.0"?>
2 <macros>
3 <xml name="test_cases">
4 <tests>
5 <test>
6 <section name="reference_genome">
7 <conditional name="ref">
8 <param name="ref_source" value="history" />
9 <param name="genome_fasta" value="1/input.fa" />
10 </conditional>
11 </section>
12
13 <section name="outputs">
14 <param name="png" value="yes" />
15 <param name="svg" value="yes" />
16 </section>
17
18 <output name="output_png" file="0/out.png" compare="sim_size" delta="15000" ftype="png"/>
19 <output name="output_svg" file="0/out.svg" compare="sim_size" delta="15000" ftype="svg"/>
20 </test>
21 <test>
22 <section name="reference_genome">
23 <conditional name="ref">
24 <param name="ref_source" value="history" />
25 <param name="genome_fasta" value="1/input.fa" />
26 </conditional>
27 </section>
28
29 <section name="outputs">
30 <param name="svg" value="yes" />
31 </section>
32
33 <section name="ticks">
34 <param name="show_ticks" value="yes" />
35
36 <repeat name="tick_group">
37 <param name="spacing" value="5000" />
38 </repeat>
39 <repeat name="tick_group">
40 <param name="spacing" value="20000" />
41 <conditional name="ticks">
42 <param name="show_tick_labels" value="yes" />
43 <param name="format" value="%.1f" />
44 </conditional>
45 </repeat>
46 </section>
47
48 <section name="sec_tdd">
49 <repeat name="data">
50 <param name="r0" value="0.8" />
51 <param name="r1" value="0.9" />
52 <conditional name="plot_format">
53 <param name="plot_format_select" value="histogram" />
54 <param name="data_source" value="1/sine.tab" />
55 </conditional>
56 </repeat>
57 <repeat name="data">
58 <param name="r0" value="0.7" />
59 <param name="r1" value="0.8" />
60 <conditional name="plot_format">
61 <param name="plot_format_select" value="scatter" />
62 <param name="data_source" value="1/sine.tab" />
63 </conditional>
64 </repeat>
65 <repeat name="data">
66 <param name="r0" value="0.6" />
67 <param name="r1" value="0.7" />
68 <conditional name="plot_format">
69 <param name="plot_format_select" value="tile" />
70 <param name="data_source" value="1/tiles.bed" />
71 </conditional>
72 </repeat>
73 </section>
74
75 <section name="sec_links">
76 <repeat name="data">
77 <param name="radius" value="0.59" />
78 <param name="data_source" value="1/links.txt"/>
79 <conditional name="linktype">
80 <param name="ribbon" value="yes" />
81 </conditional>
82 </repeat>
83 </section>
84
85 <!-- Outputs -->
86 <output name="output_png" file="1/out.png" compare="sim_size" delta="15000" ftype="png"/>
87 <output name="output_svg" file="1/out.svg" compare="sim_size" delta="15000" ftype="svg"/>
88 </test>
89 </tests>
90 </xml>
91 </macros>