Mercurial > repos > iuc > circos

comparison circos.xml @ 12:7b64033fb9b1 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
author iuc
date Mon, 22 Nov 2021 12:22:19 +0000
parents 0ee66defe58b
children 8b1cf140bbd4
comparison
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11:0ee66defe58b 12:7b64033fb9b1
606 </conditional> 606 </conditional>
607 </repeat> 607 </repeat>
608 608
609 </section> 609 </section>
610 610
611 <section name="limits" title="Limits"> 611 <expand macro="limits" />
612 <param name="max_ticks" type="integer" min="200" value="5000" label="Maximum number of ticks to draw" help="These are advanced options, if you increase these due to a plotting failure it may result in a significantly longer plotting time. Beware!"/>
613 <param name="max_ideograms" type="integer" min="200" value="200" label="Maximum number of ideograms to draw"/>
614 <param name="max_links" type="integer" min="200" value="25000" label="Maximum number of links to draw"/>
615 <param name="max_points_per_track" type="integer" min="200" value="25000" label="Maximum number of points per track"/>
616 </section>
617 612
618 <section name="outputs" title="Outputs"> 613 <section name="outputs" title="Outputs">
619 <param name="png" type="boolean" truevalue="yes" falsevalue="no" label="PNG" checked="true"/> 614 <param name="png" type="boolean" truevalue="yes" falsevalue="no" label="PNG" checked="true"/>
620 <param name="svg" type="boolean" truevalue="yes" falsevalue="no" label="SVG" checked="false" help="Oftentimes this will not be viewable directly in Galaxy, you may need to download this file first."/> 615 <param name="svg" type="boolean" truevalue="yes" falsevalue="no" label="SVG" checked="false" help="Oftentimes this will not be viewable directly in Galaxy, you may need to download this file first."/>
621 <param name="tar" type="boolean" truevalue="yes" falsevalue="no" label="Configuration Archive" checked="false" help="This contains all the files needed to make this plot. With the data contained within here, and a copy of Circos installed locally, you can rebuild the plot and make any manual changes that are not possible in Galaxy (e.g. colours not in the colour picker)"/> 616 <param name="tar" type="boolean" truevalue="yes" falsevalue="no" label="Configuration Archive" checked="false" help="This contains all the files needed to make this plot. With the data contained within here, and a copy of Circos installed locally, you can rebuild the plot and make any manual changes that are not possible in Galaxy (e.g. colours not in the colour picker)"/>