Mercurial > repos > iuc > busco

annotate test-data/transcriptome_results/short_summary @ 22:5dd4f18b0d96 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 1696bfc7f5bade0686ad6731da06a436c43b59e5
author iuc
date Sat, 04 Oct 2025 17:47:40 +0000
parents 1b5840963240
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
19
1b5840963240 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 16
diff changeset
1 # BUSCO version is: 5.7.1
1b5840963240 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 16
diff changeset
2 # The lineage dataset is: arthropoda_odb10 (Creation date: 2024-01-08, number of genomes: 90, number of BUSCOs: 1013)
1b5840963240 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 16
diff changeset
3 # Summarized benchmarking in BUSCO notation for file /tmp/tmpl5l1blpe/files/8/1/5/dataset_8150f803-80e8-4d16-9c33-eec04107fced.dat
16
d4fbde719b2a planemo upload commit f7f94fe1eccafe1e29657bbd79197b4b32e03ffe
iuc
parents: 9
diff changeset
4 # BUSCO was run in mode: euk_tran
0
edb07a3e524e planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
iuc
parents:
diff changeset
5
6
cb3bd277ea3a "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents: 2
diff changeset
6 ***** Results: *****
0
edb07a3e524e planemo upload commit 0de2ff52c643ec5bd6c26110878f2d74405fdf08
iuc
parents:
diff changeset
7
6
cb3bd277ea3a "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents: 2
diff changeset
8 C:0.1%[S:0.1%,D:0.0%],F:0.0%,M:99.9%,n:1013
cb3bd277ea3a "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents: 2
diff changeset
9 1 Complete BUSCOs (C)
cb3bd277ea3a "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents: 2
diff changeset
10 1 Complete and single-copy BUSCOs (S)
cb3bd277ea3a "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents: 2
diff changeset
11 0 Complete and duplicated BUSCOs (D)
cb3bd277ea3a "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents: 2
diff changeset
12 0 Fragmented BUSCOs (F)
cb3bd277ea3a "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents: 2
diff changeset
13 1012 Missing BUSCOs (M)
cb3bd277ea3a "planemo upload commit 22186dcfbe33d17fabd4a3c4fa39d4313978fc9c"
iuc
parents: 2
diff changeset
14 1013 Total BUSCO groups searched
9
268acdcb00d7 "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
parents: 8
diff changeset
15
268acdcb00d7 "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
parents: 8
diff changeset
16 Dependencies and versions:
268acdcb00d7 "planemo upload commit 9fa4b0e3863e3177848adddf23f6278d00fdaea1"
iuc
parents: 8
diff changeset
17 hmmsearch: 3.1
19
1b5840963240 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 16
diff changeset
18 metaeuk: 7.bba0d80
1b5840963240 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 16
diff changeset
19 python: sys.version_info(major=3, minor=9, micro=19, releaselevel='final', serial=0)
1b5840963240 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/busco/ commit 21578f94c8a18c7fd3c2e3aa36897768a4674d2a
iuc
parents: 16
diff changeset
20 busco: 5.7.1