# HG changeset patch # User iuc # Date 1635531000 0 # Node ID b60b6e82b9c6db15974497ef62b3a8b36c1fb01d # Parent 2859c35fa174b90278d6ea38d19e9f51cf8db6bc "planemo upload for repository https://github.com/davebx/bioext-gx/ commit c21521441846e419a69366ee10a30aa828573095" diff -r 2859c35fa174 -r b60b6e82b9c6 bealign.xml --- a/bealign.xml Tue Oct 05 09:50:30 2021 +0000 +++ b/bealign.xml Fri Oct 29 18:10:00 2021 +0000 @@ -3,11 +3,11 @@ to a reference using a codon alignment algorithm macros.xml - 2 + 0 gawk - samtools + samtools bealign --version diff -r 2859c35fa174 -r b60b6e82b9c6 macros.xml --- a/macros.xml Tue Oct 05 09:50:30 2021 +0000 +++ b/macros.xml Fri Oct 29 18:10:00 2021 +0000 @@ -1,6 +1,6 @@ - 0.20.1 + 0.20.2 20.05 ]") {a = gensub(/[^ACGTURYKMSWBDHVNacgturykmswbdhvn?-]/, "", "g"); } else {a=gensub(/[^>A-Za-z0-9_]/, "_", "g"); }; print a } ' | sed 's,_\\+,_,g' >]]>