Mercurial > repos > iuc > bioext_bam2msa

comparison macros.xml @ 6:7af12b491ec1 draft

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"planemo upload for repository https://github.com/davebx/bioext-gx/ commit c21521441846e419a69366ee10a30aa828573095"
author iuc
date Fri, 29 Oct 2021 18:10:32 +0000
parents 3afd5c92b4a1
children f06f478e6b9d
comparison
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5:7d4b5446b73e 6:7af12b491ec1
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <macros> 2 <macros>
3 <token name="@TOOL_VERSION@">0.20.1</token> 3 <token name="@TOOL_VERSION@">0.20.2</token>
4 <token name="@PROFILE@">20.05</token> 4 <token name="@PROFILE@">20.05</token>
5 <token name="@SANITIZE@"><![CDATA[| gawk '{ if (\$0 ~ "^[^>]") {a = gensub(/[^ACGTURYKMSWBDHVNacgturykmswbdhvn?-]/, "", "g"); } else {a=gensub(/[^>A-Za-z0-9_]/, "_", "g"); }; print a } ' | sed 's,_\\+,_,g' >]]></token> 5 <token name="@SANITIZE@"><![CDATA[| gawk '{ if (\$0 ~ "^[^>]") {a = gensub(/[^ACGTURYKMSWBDHVNacgturykmswbdhvn?-]/, "", "g"); } else {a=gensub(/[^>A-Za-z0-9_]/, "_", "g"); }; print a } ' | sed 's,_\\+,_,g' >]]></token>
6 <xml name="requirements"> 6 <xml name="requirements">
7 <requirements> 7 <requirements>
8 <requirement type="package" version="@TOOL_VERSION@">python-bioext</requirement> 8 <requirement type="package" version="@TOOL_VERSION@">python-bioext</requirement>