Mercurial > repos > iuc > biapy
diff test-data/example.yaml @ 0:356d58ae85fa draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/biapy commit 63860b5c6c21e0b76b1c55a5e71cafcb77d6cc84
| author | iuc |
|---|---|
| date | Fri, 06 Feb 2026 17:50:32 +0000 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/example.yaml Fri Feb 06 17:50:32 2026 +0000 @@ -0,0 +1,53 @@ +# BiaPy version: 3.6.2 + +SYSTEM: + NUM_CPUS: -1 + +PROBLEM: + TYPE: SEMANTIC_SEG + NDIM: 2D + +DATA: + PATCH_SIZE: (256, 256, 1) + TRAIN: + PATH: /path/to/data + GT_PATH: /path/to/data + IN_MEMORY: True + VAL: + SPLIT_TRAIN: 0.1 + TEST: + PATH: /path/to/data + GT_PATH: /path/to/data + IN_MEMORY: True + LOAD_GT: True + PADDING: (32,32) + +AUGMENTOR: + ENABLE: True + AUG_SAMPLES: False + RANDOM_ROT: True + VFLIP: True + HFLIP: True + +MODEL: + ARCHITECTURE: unet + FEATURE_MAPS: [16, 32, 64, 128, 256] + LOAD_CHECKPOINT: False + SOURCE: "bmz" + BMZ: + SOURCE_MODEL_ID: 'sensible-cat' + +TRAIN: + ENABLE: False + OPTIMIZER: ADAMW + LR: 1.E-3 + BATCH_SIZE: 6 + EPOCHS: 20 + PATIENCE: 20 + LR_SCHEDULER: + NAME: 'onecycle' # use one-cycle learning rate scheduler + +TEST: + ENABLE: True + AUGMENTATION: False + FULL_IMG: False
