Mercurial > repos > iuc > bedtools

diff closestBed.xml @ 22:ac8b17b66663 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 6ce9a5a91d803b9ac9e743d9721ff0ccd2a5a59f
author iuc
date Fri, 20 May 2016 14:27:39 -0400
parents 818cc3c02d70
children c0fbce5dc84a
line wrap: on
line diff
--- a/closestBed.xml	Sat Feb 27 12:56:20 2016 -0500
+++ b/closestBed.xml	Fri May 20 14:27:39 2016 -0400
@@ -7,7 +7,7 @@
     <expand macro="stdio" />
     <command>
 <![CDATA[
-        #set inputBs = ' '.join( [ str( $file ) for $file in $inputB ] )
+        #set inputBs = "' '".join([str( $file ) for $file in $inputB])
 
         closestBed
         $strand
@@ -23,8 +23,8 @@
         #if $k:
             -k $k
         #end if
-        -a $inputA
-        -b $inputBs
+        -a '$inputA'
+        -b '$inputBs'
         > $output
 ]]>
     </command>