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comparison sortBed.xml @ 42:d279800f4ff9 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit b75b9e79cf3186a22dc2e1e9d27c1a080b891b59
author iuc
date Thu, 26 Apr 2018 17:02:24 -0400
parents c0fbce5dc84a
children 2f457890d8c8
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41:c96688f1746d 42:d279800f4ff9
12 $option 12 $option
13 > '$output' 13 > '$output'
14 ]]> 14 ]]>
15 </command> 15 </command>
16 <inputs> 16 <inputs>
17 <param format="bed,gff,gff3,vcf" name="input" type="data" label="Sort the following BED file"/> 17 <param format="@STD_BEDTOOLS_INPUTS@" name="input" type="data" label="Sort the following @STD_BEDTOOLS_INPUT_LABEL@ file"/>
18 <param name="option" type="select" label="Sort by"> 18 <param name="option" type="select" label="Sort by">
19 <!-- sort -k 1,1 -k2,2 -n a.bed --> 19 <!-- sort -k 1,1 -k2,2 -n a.bed -->
20 <option value="">chromosome, then by start position (asc)</option> 20 <option value="">chromosome, then by start position (asc)</option>
21 <option value="-sizeA">feature size in ascending order.</option> 21 <option value="-sizeA">feature size in ascending order.</option>
22 <option value="-sizeD">feature size in descending order.</option> 22 <option value="-sizeD">feature size in descending order.</option>