Mercurial > repos > iuc > bedtools

comparison slopBed.xml @ 26:c0fbce5dc84a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 19967671ddd4e750f53d71274e5c12325a402811
author iuc
date Mon, 17 Oct 2016 10:13:20 -0400
parents a2d4c30ba2f9
children b0d5e752c0c5
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25:6c6963cf9136 26:c0fbce5dc84a
8 <command> 8 <command>
9 <![CDATA[ 9 <![CDATA[
10 bedtools slop 10 bedtools slop
11 $pct 11 $pct
12 $strand 12 $strand
13 -g $genome 13 -g '$genome'
14 -i $inputA 14 -i '$inputA'
15 #if $addition.addition_select == 'b': 15 #if $addition.addition_select == 'b':
16 -b $addition.b 16 -b $addition.b
17 #else: 17 #else:
18 -l $addition.l 18 -l $addition.l
19 -r $addition.r 19 -r $addition.r
20 #end if 20 #end if
21 $header 21 $header
22 > $output 22 > '$output'
23 ]]> 23 ]]>
24 </command> 24 </command>
25 <inputs> 25 <inputs>
26 <param format="bed,vcf,gff,gff3" name="inputA" type="data" label="BED/VCF/GFF file"/> 26 <param format="bed,vcf,gff,gff3" name="inputA" type="data" label="BED/VCF/GFF file"/>
27 <expand macro="genome" /> 27 <expand macro="genome" />