Mercurial > repos > iuc > bedtools

comparison nucBed.xml @ 26:c0fbce5dc84a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 19967671ddd4e750f53d71274e5c12325a402811
author iuc
date Mon, 17 Oct 2016 10:13:20 -0400
parents a2d4c30ba2f9
children 7f4f9bb165c9
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25:6c6963cf9136 26:c0fbce5dc84a
10 bedtools nuc 10 bedtools nuc
11 $strand 11 $strand
12 $seq 12 $seq
13 $pattern 13 $pattern
14 $case 14 $case
15 -fi $fasta 15 -fi '$fasta'
16 -bed $input 16 -bed '$input'
17 > $output 17 > '$output'
18 ]]> 18 ]]>
19 </command> 19 </command>
20 <inputs> 20 <inputs>
21 <param format="bed,vcf,gff,gff3" name="input" type="data" label="BED/VCF/GFF file"/> 21 <param format="bed,vcf,gff,gff3" name="input" type="data" label="BED/VCF/GFF file"/>
22 <param format="fasta" name="fasta" type="data" label="FASTA file"/> 22 <param format="fasta" name="fasta" type="data" label="FASTA file"/>