Mercurial > repos > iuc > bedtools

comparison fisherBed.xml @ 26:c0fbce5dc84a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 19967671ddd4e750f53d71274e5c12325a402811
author iuc
date Mon, 17 Oct 2016 10:13:20 -0400
parents a2d4c30ba2f9
children b0d5e752c0c5
comparison
equal deleted inserted replaced
25:6c6963cf9136 26:c0fbce5dc84a
8 <command> 8 <command>
9 <![CDATA[ 9 <![CDATA[
10 bedtools fisher 10 bedtools fisher
11 $strand 11 $strand
12 $split 12 $split
13 -a $inputA 13 -a '$inputA'
14 -b $inputB 14 -b '$inputB'
15 -f $overlap 15 -f $overlap
16 -g $genome 16 -g $genome
17 $reciprocal 17 $reciprocal
18 $m 18 $m
19 > $output 19 > '$output'
20 ]]> 20 ]]>
21 </command> 21 </command>
22 <inputs> 22 <inputs>
23 <param format="bed,vcf,gff,gff3" name="inputA" type="data" label="BED/VCF/GFF file"/> 23 <param format="bed,vcf,gff,gff3" name="inputA" type="data" label="BED/VCF/GFF file"/>
24 <param format="bed,gff,vcf,gff3" name="inputB" type="data" label="BED/VCF/GFF file"/> 24 <param format="bed,gff,vcf,gff3" name="inputB" type="data" label="BED/VCF/GFF file"/>