Mercurial > repos > iuc > bedtools

comparison annotateBed.xml @ 26:c0fbce5dc84a draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit 19967671ddd4e750f53d71274e5c12325a402811
author iuc
date Mon, 17 Oct 2016 10:13:20 -0400
parents 5efc48568d8d
children d279800f4ff9
comparison
equal deleted inserted replaced
25:6c6963cf9136 26:c0fbce5dc84a
1 <tool id="bedtools_annotatebed" name="AnnotateBed" version="@WRAPPER_VERSION@.1"> 1 <tool id="bedtools_annotatebed" name="AnnotateBed" version="@WRAPPER_VERSION@.0">
2 <description>annotate coverage of features from multiple files</description> 2 <description>annotate coverage of features from multiple files</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="requirements" /> 6 <expand macro="requirements" />
50 <param name="beds" format="bed" multiple="True" type="data" label="BED file" /> 50 <param name="beds" format="bed" multiple="True" type="data" label="BED file" />
51 </when> 51 </when>
52 </conditional> 52 </conditional>
53 <expand macro="strand2" /> 53 <expand macro="strand2" />
54 <param name="counts" type="boolean" checked="false" truevalue="-counts" falsevalue="" 54 <param name="counts" type="boolean" checked="false" truevalue="-counts" falsevalue=""
55 label="Report the count of features followed by the % coverage for each annotation file" 55 label="Report the count of features followed by the % coverage for each annotation file"
56 help="Default is to report solely the fraction of -i covered by each file." /> 56 help="Default is to report solely the fraction of -i covered by each file." />
57 <param name="both" type="boolean" checked="false" truevalue="-both" falsevalue="" 57 <param name="both" type="boolean" checked="false" truevalue="-both" falsevalue=""
58 label="Report the count of features followed by the % coverage for each annotation file" 58 label="Report the count of features followed by the % coverage for each annotation file"
59 help="Default is to report solely the fraction of the input file covered by each file." /> 59 help="Default is to report solely the fraction of the input file covered by each file." />
60 </inputs> 60 </inputs>
61 <outputs> 61 <outputs>
62 <data format="bed" name="output" /> 62 <data format="bed" name="output" />
63 </outputs> 63 </outputs>