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comparison randomBed.xml @ 61:9f6bd4c9479f draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit db0b91a784ca0c216345bc488d7d488babf1b53f"
author iuc
date Fri, 01 Apr 2022 19:00:48 +0000
parents 539958feb49c
children f6c88d2e9ae5
comparison
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60:36d57dc82aa6 61:9f6bd4c9479f
1 <tool id="bedtools_randombed" name="bedtools RandomBed" version="@TOOL_VERSION@" profile="@PROFILE@"> 1 <tool id="bedtools_randombed" name="bedtools RandomBed" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@">
2 <description>generate random intervals in a genome</description> 2 <description>generate random intervals in a genome</description>
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <expand macro="bio_tools" /> 6 <expand macro="bio_tools" />
7 <expand macro="requirements" /> 7 <expand macro="requirements" />
8 <expand macro="stdio" /> 8 <expand macro="stdio" />
9 <command><![CDATA[ 9 <command><![CDATA[
10 bedtools random 10 bedtools random
11 -g @GENOME_FILE@ 11 @GENOME_FILE@
12 -l $length 12 -l $length
13 -n $intervals 13 -n $intervals
14 #if str($seed.seed_choose) == "True": 14 #if str($seed.seed_choose) == "True":
15 -seed $seed.seed 15 -seed $seed.seed
16 #end if 16 #end if