Mercurial > repos > iuc > bedtools

comparison flankBed.xml @ 18:5efc48568d8d draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools commit e5a5ad091c621348dc6ce2df861475ebc54a380e
author iuc
date Tue, 13 Oct 2015 17:20:34 -0400
parents a2d4c30ba2f9
children c0fbce5dc84a
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17:a2d4c30ba2f9 18:5efc48568d8d
25 <inputs> 25 <inputs>
26 <param format="bed,vcf,gff,gff3" name="input" type="data" label="BED/VCF/GFF file"/> 26 <param format="bed,vcf,gff,gff3" name="input" type="data" label="BED/VCF/GFF file"/>
27 <expand macro="genome" /> 27 <expand macro="genome" />
28 <param name="pct" type="boolean" checked="false" truevalue="-pct" falsevalue="" 28 <param name="pct" type="boolean" checked="false" truevalue="-pct" falsevalue=""
29 label="Define -l and -r as a fraction of the feature’s length" 29 label="Define -l and -r as a fraction of the feature’s length"
30 help="E.g. if used on a 1000bp feature, -l 0.50, will add 500 bp “upstream”" /> 30 help="E.g. if used on a 1000bp feature, -l 0.50, will add 500 bp “upstream”. (-pct)" />
31 <param name="strand" type="boolean" checked="false" truevalue="-s" falsevalue="" 31 <param name="strand" type="boolean" checked="false" truevalue="-s" falsevalue=""
32 label="Define -l and -r based on strand" 32 label="Define -l and -r based on strand"
33 help="For example. if used, -l 500 for a negative-stranded feature, it will add 500 bp to the end coordinate" /> 33 help="For example. if used, -l 500 for a negative-stranded feature, it will add 500 bp to the end coordinate. (-s)" />
34 <expand macro="addition" /> 34 <expand macro="addition" />
35 </inputs> 35 </inputs>
36 <outputs> 36 <outputs>
37 <data metadata_source="input" format_source="input" name="output" /> 37 <data metadata_source="input" format_source="input" name="output" />
38 </outputs> 38 </outputs>