Mercurial > repos > iuc > bedtools

comparison expandBed.xml @ 0:4fb5ea02b441 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author iuc
date Tue, 15 Jul 2014 14:42:23 -0400
parents
children 7511823bdea1
comparison
equal deleted inserted replaced
-1:000000000000 0:4fb5ea02b441
1 <tool id="bedtools_expandbed" name="ExpandBed" version="@WRAPPER_VERSION@.0">
2 <description></description>
3 <macros>
4 <import>macros.xml</import>
5 </macros>
6 <expand macro="requirements" />
7 <expand macro="stdio" />
8 <command>
9 bedtools expand
10 -c $cols
11 -i $inputA
12 &gt; $output
13 </command>
14 <inputs>
15 <param format="bed,vcf,gff,gff3" name="inputA" type="data" label="BED/VCF/GFF file"/>
16 <param name="cols" type="text" value="" label="Specify the column(s) (comma separated) that should be summarized" />
17 </inputs>
18 <outputs>
19 <data format_source="inputA" name="output" metadata_source="inputA" label=""/>
20 </outputs>
21 <help>
22
23 **What it does**
24
25 Replicate lines in a file based on columns of comma-separated values.
26
27 @REFERENCES@
28 </help>
29 </tool>