Mercurial > repos > iuc > bcftools_plugin_missing2ref

diff bcftools_plugin_missing2ref.xml @ 5:dbaf17be36d6 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 10853682ffb2e9776256bb63c899ef5c5fe0007e
author: iuc
date: Thu, 13 Apr 2017 16:28:40 -0400
parents: 241d263d0c4f
children: d43b5e0cbf74
--- a/bcftools_plugin_missing2ref.xml	Sat Mar 11 17:54:33 2017 -0500
+++ b/bcftools_plugin_missing2ref.xml	Thu Apr 13 16:28:40 2017 -0400
@@ -13,6 +13,7 @@
 @PREPARE_INPUT_FILE@
 #set $section = $sec_restrict
 @PREPARE_TARGETS_FILE@
+@PREPARE_REGIONS_FILE@
 
 bcftools plugin @EXECUTABLE@
 
@@ -36,7 +37,7 @@
 ${section.phased}
 ${section.major}
 #end if
-> "$output_file"
+> '$output_file'
 ]]>
     </command>
     <inputs>