Mercurial > repos > iuc > bcftools_plugin_dosage

comparison bcftools_plugin_dosage.xml @ 25:eabe3a37b965 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/bcftools commit f6efda26965eb73c9107d367fd5ffdf246ed0dbc
author iuc
date Tue, 02 Dec 2025 07:57:18 +0000
parents 63741f5e69d8
children
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24:63741f5e69d8 25:eabe3a37b965
7 </macros> 7 </macros>
8 <expand macro="bio_tools" /> 8 <expand macro="bio_tools" />
9 <expand macro="requirements" /> 9 <expand macro="requirements" />
10 <expand macro="version_command" /> 10 <expand macro="version_command" />
11 <command detect_errors="aggressive"><![CDATA[ 11 <command detect_errors="aggressive"><![CDATA[
12 @PREPARE_ENV@
13 @PREPARE_INPUT_FILE@ 12 @PREPARE_INPUT_FILE@
14 #set $section = $sec_restrict 13 #set $section = $sec_restrict
15 @PREPARE_TARGETS_FILE@ 14 @PREPARE_TARGETS_FILE@
16 @PREPARE_REGIONS_FILE@ 15 @PREPARE_REGIONS_FILE@
17 16
37 ]]> 36 ]]>
38 </command> 37 </command>
39 <inputs> 38 <inputs>
40 <expand macro="macro_input" /> 39 <expand macro="macro_input" />
41 <section name="sec_restrict" expanded="false" title="Restrict to"> 40 <section name="sec_restrict" expanded="false" title="Restrict to">
42 <expand macro="macro_restrict" /> 41 <expand macro="macro_region_restrict" />
43 <expand macro="macro_restrict" type="target" label_type="Target" /> 42 <expand macro="macro_target_restrict" />
44 <expand macro="macro_include" /> 43 <expand macro="macro_include" />
45 <expand macro="macro_exclude" /> 44 <expand macro="macro_exclude" />
46 </section> 45 </section>
47 <section name="sec_plugin" expanded="true" title="Plugin Options"> 46 <section name="sec_plugin" expanded="true" title="Plugin Options">
48 <param name="tags" type="text" value="" optional="true" label="VCF tag to determine the dosage from [PL,GL,GT]"> 47 <param name="tags" type="text" value="" optional="true" label="VCF tag to determine the dosage from [PL,GL,GT]">