Mercurial > repos > iuc > bcftools_isec

comparison bcftools_isec.xml @ 5:aab8f1eaddd8 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 10853682ffb2e9776256bb63c899ef5c5fe0007e
author iuc
date Thu, 13 Apr 2017 16:28:05 -0400
parents 4e32e1dbc2ba
children 75428e72ed50
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4:4e32e1dbc2ba 5:aab8f1eaddd8
10 <command detect_errors="aggressive"><![CDATA[ 10 <command detect_errors="aggressive"><![CDATA[
11 @PREPARE_ENV@ 11 @PREPARE_ENV@
12 @PREPARE_INPUT_FILES@ 12 @PREPARE_INPUT_FILES@
13 #set $section = $sec_restrict 13 #set $section = $sec_restrict
14 @PREPARE_TARGETS_FILE@ 14 @PREPARE_TARGETS_FILE@
15 @PREPARE_REGIONS_FILE@
15 16
16 bcftools @EXECUTABLE@ 17 bcftools @EXECUTABLE@
17 18
18 ## Default section 19 ## Default section
19 #set $section = $sec_default 20 #set $section = $sec_default
33 @OUTPUT_TYPE@ 34 @OUTPUT_TYPE@
34 @THREADS@ 35 @THREADS@
35 36
36 ## Primary Input/Outputs 37 ## Primary Input/Outputs
37 @INPUT_FILES@ 38 @INPUT_FILES@
38 > "$output_file" 39 > '$output_file'
39 40
40 ]]> 41 ]]>
41 </command> 42 </command>
42 <inputs> 43 <inputs>
43 <expand macro="macro_inputs" /> 44 <expand macro="macro_inputs" />