Mercurial > repos > iuc > bcftools_csq

annotate test-data/stats.a.vcf @ 3:d382bcadbdba draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 2684e1443f03bfe2ae20c31d23817415ec8f7e69
author iuc
date Thu, 21 Feb 2019 15:42:22 -0500
parents 01d07c39810b
children ca184d0a0220
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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01d07c39810b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 10853682ffb2e9776256bb63c899ef5c5fe0007e
iuc
parents:
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1 ##fileformat=VCFv4.2
01d07c39810b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 10853682ffb2e9776256bb63c899ef5c5fe0007e
iuc
parents:
diff changeset
2 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
01d07c39810b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 10853682ffb2e9776256bb63c899ef5c5fe0007e
iuc
parents:
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3 ##contig=<ID=1,assembly=b37,length=249250621>
01d07c39810b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 10853682ffb2e9776256bb63c899ef5c5fe0007e
iuc
parents:
diff changeset
4 ##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta
01d07c39810b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 10853682ffb2e9776256bb63c899ef5c5fe0007e
iuc
parents:
diff changeset
5 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B C
01d07c39810b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 10853682ffb2e9776256bb63c899ef5c5fe0007e
iuc
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6 1 1000 . G A . PASS . GT 0/0 0/1 1/1
01d07c39810b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 10853682ffb2e9776256bb63c899ef5c5fe0007e
iuc
parents:
diff changeset
7 1 1001 . G A . PASS . GT 0/0 0/1 1/1
01d07c39810b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 10853682ffb2e9776256bb63c899ef5c5fe0007e
iuc
parents:
diff changeset
8 1 1002 . G A . PASS . GT 0/0 0/1 1/1