Mercurial > repos > iuc > bcftools_convert_from_vcf

comparison macros.xml @ 3:fa7b68f5022c draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit 9df9b52baf62b70fbcfc3fbe965d7197d4e8738e
author iuc
date Tue, 31 Jan 2017 12:35:23 -0500
parents c7a96d77a661
children e6f4932ceb70
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2:c7a96d77a661 3:fa7b68f5022c
12 <xml name="requirements"> 12 <xml name="requirements">
13 <requirements> 13 <requirements>
14 <requirement type="package" version="1.3">bcftools</requirement> 14 <requirement type="package" version="1.3">bcftools</requirement>
15 <!-- conda dependency --> 15 <!-- conda dependency -->
16 <requirement type="package" version="1.3">htslib</requirement> 16 <requirement type="package" version="1.3">htslib</requirement>
17 <!-- htslib provides tabix and bgzip
17 <requirement type="package" version="0.2.6">tabix</requirement> 18 <requirement type="package" version="0.2.6">tabix</requirement>
19 -->
18 <requirement type="package" version="1.2">samtools</requirement> 20 <requirement type="package" version="1.2">samtools</requirement>
19 </requirements> 21 </requirements>
20 </xml> 22 </xml>
21 <xml name="version_command"> 23 <xml name="version_command">
22 <version_command>bcftools 2&gt;&amp;1 | grep 'Version:'</version_command> 24 <version_command>bcftools 2&gt;&amp;1 | grep 'Version:'</version_command>