Mercurial > repos > iuc > bcftools_convert_from_vcf

comparison test-data/stats.a.vcf @ 9:d9e4bcdd052f draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools commit e648d86d550ddf2eb67237752320c390b3a780e5
author iuc
date Wed, 05 Jun 2019 12:53:28 -0400
parents 6004a3019af5
children
comparison
equal deleted inserted replaced
8:6c6b5c192e0c 9:d9e4bcdd052f
1 ##fileformat=VCFv4.2 1 ##fileformat=VCFv4.2
2 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype"> 2 ##FORMAT=<ID=GT,Number=1,Type=String,Description="Genotype">
3 ##contig=<ID=1,assembly=b37,length=249250621> 3 ##contig=<ID=1,assembly=b37,length=249250621>
4 ##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta 4 ##reference=file:///lustre/scratch105/projects/g1k/ref/main_project/human_g1k_v37.fasta
5 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B C 5 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT A B C
6 1 1000 . G A . PASS . GT 0/0 0/1 1/1 6 1 1000 . G A . PASS . GT 0|0 0|1 1|1
7 1 1001 . G A . PASS . GT 0/0 0/1 1/1 7 1 1001 . G A . PASS . GT 0/0 0|1 1|1
8 1 1002 . G A . PASS . GT 0/0 0/1 1/1 8 1 1002 . G A . PASS . GT 0|0 0|1 1|1