Mercurial > repos > iuc > bbgbigwig

comparison test-data/test5.gff3 @ 0:65a296d558e7 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/bbgbigwig commit decf6daa4769664f779bc088b83b0f89ac1df147
author iuc
date Fri, 12 Dec 2025 21:28:28 +0000
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-1:000000000000 0:65a296d558e7
1 ##gff-version 3
2 ##date Tue Jun 26 10:48:17 2007
3 ##sequence-region ctgA 1 50000
4 ##source gbrowse GFFToGalaxyDumper plugin
5 ##NOTE: All features dumped.
6 ctgA example my_feature 22132 24633 . + . ID=My_feature:f15
7 ctgA example my_feature 46990 48410 . - . ID=My_feature:f11
8 ctgA example my_feature 44705 47713 . - . ID=My_feature:f01
9 ctgA example my_feature 36649 40440 . - . ID=My_feature:f03
10 ctgA example my_feature 23072 23185 . + . ID=My_feature:f14
11 ctgA example my_feature 37242 38653 . + . ID=My_feature:f04
12 ctgA example motif 37497 40559 . - . ID=Motif:m15;Note=7-transmembrane
13 ctgA example my_feature 36034 38167 . + . ID=My_feature:f09
14 ctgA example motif 28332 30033 . - . ID=Motif:m02;Note=HOX
15 ctgA example my_feature 4715 5968 . - . ID=My_feature:f05
16 ctgA example motif 48253 48366 . + . ID=Motif:m01;Note=WD40
17 ctgA example BAC 1000 20000 . . . ID=BAC:b101.2;Note=Fingerprinted+BAC+with+end+reads
18 ctgA example right_end_read 19500 20000 . - . Parent=BAC:b101.2
19 ctgA example left_end_read 1000 1500 . + . Parent=BAC:b101.2
20 ctgA example motif 13801 14007 . - . ID=Motif:m05;Note=helix+loop+helix
21 ctgA example coding 1050 9000 . + . ID=mRNA:EDEN.1;Gene=EDEN
22 ctgA example CDS 1201 1500 . + 0 Parent=mRNA:EDEN.1
23 ctgA example CDS 3000 3902 . + 0 Parent=mRNA:EDEN.1
24 ctgA example CDS 5000 5500 . + 0 Parent=mRNA:EDEN.1
25 ctgA example CDS 7000 7608 . + 0 Parent=mRNA:EDEN.1
26 ctgA example processed_transcript 1050 9000 . + . ID=mRNA:EDEN.1
27 ctgA example 5'-UTR 1050 1200 . + . Parent=mRNA:EDEN.1
28 ctgA example 3'-UTR 7609 9000 . + . Parent=mRNA:EDEN.1
29 ctgA est match 5410 7503 . - . ID=EST:agt830.3;Target=agt830.3+1+595
30 ctgA est HSP 7000 7503 . - . Parent=EST:agt830.3;Target=agt830.3+1+504
31 ctgA est HSP 5410 5500 . - . Parent=EST:agt830.3;Target=agt830.3+505+595
32 ctgA example motif 46012 48851 . + . ID=Motif:m09;Note=kinase
33 ctgA example match 6885 8999 . - . ID=Match:seg03
34 ctgA example HSP 8306 8999 . - . Parent=Match:seg03
35 ctgA example HSP 8055 8080 . - . Parent=Match:seg03
36 ctgA example HSP 7410 7737 . - . Parent=Match:seg03
37 ctgA example HSP 6885 7241 . - . Parent=Match:seg03
38 ctgA example my_feature 13280 16394 . + . ID=My_feature:f08