Mercurial > repos > iuc > bakta

comparison test-data/tmp/TEST_4/TEST_4.embl @ 0:fc31d760b233 draft

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planemo upload for repository https://github.com/mesocentre-clermont-auvergne/galaxy-tools/tree/master/tools/bakta commit 7d595b05b8d595f554b57dadbf1beb0b39733af3
author iuc
date Thu, 01 Sep 2022 17:26:54 +0000
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-1:000000000000 0:fc31d760b233
1 ID p2; ; circular; DNA; ; PRO; 1330 BP.
2 XX
3 AC p2;
4 XX
5 DE plasmid pOSAK1, complete sequence
6 XX
7 OS .
8 OC .
9 XX
10 CC Annotated with Bakta
11 CC Software: v1.4.2
12 CC Database: v3.0
13 CC DOI: 10.1099/mgen.0.000685
14 CC URL: github.com/oschwengers/bakta
15 CC
16 CC ##Genome Annotation Summary:##
17 CC Annotation Date :: 08/22/2022, 12:58:56
18 CC Annotation Pipeline :: Bakta
19 CC Annotation Software version :: v1.4.2
20 CC Annotation Database version :: v3.0
21 CC CDSs :: 2
22 CC tRNAs :: 0
23 CC tmRNAs :: 0
24 CC rRNAs :: 0
25 CC ncRNAs :: 0
26 CC regulatory ncRNAs :: 0
27 CC CRISPR Arrays :: 0
28 CC oriCs/oriVs :: 0
29 CC oriTs :: 0
30 CC gaps :: 0
31 XX
32 FH Key Location/Qualifiers
33 FH
34 FT source 1..1330
35 FT /mol_type="genomic DNA"
36 FT /plasmid="pOSAK1"
37 FT gene 413..736
38 FT /locus_tag="IHHALP_00005"
39 FT CDS 413..736
40 FT /product="hypothetical protein"
41 FT /locus_tag="IHHALP_00005"
42 FT /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLRA
43 FT AALGKKVNSLTDDRVLKEVMRLGALQKKLFIDGKRVGDREYAEVLIAITEYHRALLSRL
44 FT MAD"
45 FT /codon_start=1
46 FT /transl_table=4
47 FT /protein_id="gnl|Bakta|IHHALP_00005"
48 FT /inference="ab initio prediction:Prodigal:2.6"
49 FT gene complement(join(971..1330,1..141))
50 FT /locus_tag="IHHALP_00010"
51 FT CDS complement(join(971..1330,1..141))
52 FT /product="hypothetical protein"
53 FT /locus_tag="IHHALP_00010"
54 FT /translation="MNKQQQTALNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHELA
55 FT EEQIEAIKNKDKTLFIVYATDIYSPSEFFSKIESDLKKKKSKGDVFFDLIIPNGGKKDR
56 FT YVYTSFNGEKFSSYTLNKVTKTDEYNDLSELSASFFKKNFDKINVNLLSKATSFALKKG
57 FT IPI"
58 FT /codon_start=1
59 FT /transl_table=4
60 FT /protein_id="gnl|Bakta|IHHALP_00010"
61 FT /inference="ab initio prediction:Prodigal:2.6"
62 XX
63 SQ Sequence 1330 BP; 330 A; 291 C; 310 G; 399 T; 0 other;
64 ttcttctgcg agttcgtgca gcttctcaca catggtggcc tgctcgtcag catcgagtgc 60
65 gtccagtttt tcgagcagcg tcaggctctg gctttttatg aatcccgcca tgttgagtgc 120
66 agtttgctgc tgcttgttca tctttctgtt ttctccgttc tgtctgtcat ctgcgtcgtg 180
67 tgattatatc gcgcaccact tttcgaccgt cttaccgccg gtattctgcc gacggacatt 240
68 tcagtcagac aacactgtca ctgccaaaaa acagcagtgc tttgttggta attcgaactt 300
69 gcagacagga caggatgtgc aattgttata ccgcgcatac atgcacgcta ttacaattac 360
70 cctggtcagg gcttcgcccc gacaccccat gtcagatacg gagccatgtt ttatgacaaa 420
71 acgaagtgga agtaatacgc gcaggcgggc tatcagtcgc cctgttcgtc tgacggcaga 480
72 agaagaccag gaaatcagaa aaagggctgc tgaatgcggc aagaccgttt ctggtttttt 540
73 acgggcggca gctctcggta agaaagttaa ctcactgact gatgaccggg tgctgaaaga 600
74 agttatgcga ctgggggcgt tgcagaaaaa actctttatc gacggcaagc gtgtcgggga 660
75 cagagagtat gcggaggtgc tgatcgctat tacggagtat caccgtgccc tgttatccag 720
76 gcttatggca gattagcttc ccggagagaa actgtcgaaa acagacggta tgaacgccgt 780
77 aagcccccaa accgatcgcc attcactttc atgcatagct atgcagtgag ctgaaagcga 840
78 tcctgacgca tttttccggt ttaccccggg gaaaacatct ctttttgcgg tgtctgcgtc 900
79 agaatcgcgt tcagcgcgtt ttggcggtgc gcgtaatgag acgttatggt aaatgtcttc 960
80 tggcttgata ttatattgga atgccttttt tcaaagcaaa tgatgtggct ttggatagaa 1020
81 ggtttacgtt gatcttatca aagttttttt taaagaacga agccgagagc tcagataaat 1080
82 cattatattc atcagttttc gtaactttgt ttaatgtgta acttgaaaac ttctcgccat 1140
83 taaatgacgt atagacgtaa cgatcttttt ttccaccgtt aggaattatt aaatcaaaaa 1200
84 aaacatcacc cttgcttttc tttttcttca agtcggattc gatttttgag aaaaattcgc 1260
85 tcgggctata aatatcagta gcatagacaa taaataaagt tttatcttta ttttttattg 1320
86 cttctatttg 1330
87 //