Mercurial > repos > iuc > autobigs

diff test-data/all_mlsts.csv @ 0:a5231f824c47 draft default tip

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planemo upload for repository https://github.com/Syph-and-VPD-Lab/autoBIGS.cli commit 06d653e04139b58b7e9ba76ae31e74a31a31a3f3
author iuc
date Fri, 28 Feb 2025 17:59:00 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/all_mlsts.csv	Fri Feb 28 17:59:00 2025 +0000
@@ -0,0 +1,4 @@
+id,st,clonal-complex,adk,fumC,glyA,icd,pepA,pgm,tyrB
+"('lcl|CP011447.1_gene_2762', 'lcl|CP011447.1_gene_253', 'lcl|CP011447.1_gene_2963', 'lcl|CP011447.1_gene_2473', 'lcl|CP011447.1_gene_2403', 'lcl|CP011447.1_gene_3165', 'lcl|CP011447.1_gene_2110')",2,ST-2 complex,1,1,1,1,1,1,3
+"('lcl|BX640419.1_cds_CAE43044.1_2724', 'lcl|BX640411.1_cds_CAE40628.1_248', 'lcl|BX640420.1_cds_CAE43224.1_2904', 'lcl|BX640418.1_cds_CAE42760.1_2440', 'lcl|BX640418.1_cds_CAE42692.1_2372', 'lcl|BX640420.1_cds_CAE43408.1_3088', 'lcl|BX640416.1_cds_CAE42081.1_1761')",1,ST-2 complex,1,1,1,1,1,1,1
+"('lcl|CP011448.1_cds_ALH77808.1_2459', 'lcl|CP011448.1_cds_ALH75563.1_214', 'lcl|CP011448.1_cds_ALH77981.1_2632', 'lcl|CP011448.1_cds_ALH77547.1_2198', 'lcl|CP011448.1_cds_ALH77480.1_2131', 'lcl|CP011448.1_cds_ALH78163.1_2814', 'lcl|CP011448.1_cds_ALH77215.1_1866')",2,ST-2 complex,1,1,1,1,1,1,3