Mercurial > repos > iuc > amrfinderplus

diff test-data/test-db/AMRProt-susceptible.tab @ 0:d06eb6832e26 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/amrfinderplus commit 73f592a7f1c1e9577bbf56a1347bd5c01bb8ea14
author iuc
date Fri, 26 May 2023 09:18:37 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test-db/AMRProt-susceptible.tab	Fri May 26 09:18:37 2023 +0000
@@ -0,0 +1,27 @@
+#taxgroup	gene_symbol	accession_version	resistance_cutoff	class	subclass	resistance_protein_name
+Neisseria_gonorrhoeae	pbp2	WP_003703066.1	           94.000000	BETA-LACTAM	BETA-LACTAM	Neisseria_gonorrhoeae_beta-lactam_resistant_PBP2
+Streptococcus_pneumoniae	pbp1a	WP_001039998.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP1A
+Streptococcus_pneumoniae	pbp1a	WP_001040004.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP1A
+Streptococcus_pneumoniae	pbp1a	WP_001040010.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP1A
+Streptococcus_pneumoniae	pbp1a	WP_001040013.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP1A
+Streptococcus_pneumoniae	pbp1a	WP_050078510.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP1A
+Streptococcus_pneumoniae	pbp1a	WP_050208712.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP1A
+Streptococcus_pneumoniae	pbp1a	WP_054370471.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP1A
+Streptococcus_pneumoniae	pbp2b	WP_001224867.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2B
+Streptococcus_pneumoniae	pbp2b	WP_001224871.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2B
+Streptococcus_pneumoniae	pbp2b	WP_001224884.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2B
+Streptococcus_pneumoniae	pbp2b	WP_001224885.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2B
+Streptococcus_pneumoniae	pbp2b	WP_001224886.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2B
+Streptococcus_pneumoniae	pbp2b	WP_061634854.1	           99.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2B
+Streptococcus_pneumoniae	pbp2x	WP_000872264.1	           98.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2X
+Streptococcus_pneumoniae	pbp2x	WP_000872267.1	           98.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2X
+Streptococcus_pneumoniae	pbp2x	WP_000872270.1	           98.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2X
+Streptococcus_pneumoniae	pbp2x	WP_000872271.1	           98.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2X
+Streptococcus_pneumoniae	pbp2x	WP_000872273.1	           98.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2X
+Streptococcus_pneumoniae	pbp2x	WP_000872275.1	           98.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2X
+Streptococcus_pneumoniae	pbp2x	WP_000872277.1	           98.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2X
+Streptococcus_pneumoniae	pbp2x	WP_000872282.1	           98.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2X
+Streptococcus_pneumoniae	pbp2x	WP_033707918.1	           98.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2X
+Streptococcus_pneumoniae	pbp2x	WP_050293540.1	           98.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2X
+Streptococcus_pneumoniae	pbp2x	WP_054364452.1	           98.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2X
+Streptococcus_pneumoniae	pbp2x	WP_061745305.1	           98.000000	BETA-LACTAM	BETA-LACTAM	Streptococcus_pneumoniae_beta-lactam_resistant_PBP2X