Mercurial > repos > iracooke > xtandem
diff tandem.xml @ 19:fc1decb780ba draft
planemo upload for repository https://github.com/iracooke/protk-galaxytools/tree/master/xtandem commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
| author | iracooke |
|---|---|
| date | Tue, 20 Oct 2015 20:47:33 -0400 |
| parents | 529ea20c1e6c |
| children | 9765dd041c04 |
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--- a/tandem.xml Sun May 24 01:12:42 2015 -0400 +++ b/tandem.xml Tue Oct 20 20:47:33 2015 -0400 @@ -1,8 +1,8 @@ -<tool id="proteomics_search_tandem_1" name="X!Tandem MSMS Search" version="1.1.0"> +<tool id="proteomics_search_tandem_1" name="X!Tandem MSMS Search" version="1.1.1"> <description>Run an X!Tandem Search</description> <requirements> - <container type="docker">iracooke/protk-1.4.1</container> - <requirement type="package" version="1.4.2">protk</requirement> + <container type="docker">iracooke/protk-1.4.3</container> + <requirement type="package" version="1.4.3">protk</requirement> </requirements> <command> #if $database.source_select=="built_in": @@ -44,7 +44,7 @@ $acetyl_protein_nterm $cleavage_semi $keep_spectra - --threads "\${GALAXY_SLOTS:-1}" + --threads "\${GALAXY_SLOTS:-12}" </command> <inputs> @@ -127,7 +127,7 @@ <label>Enzyme</label> <option value="[R]__pc__{P}">argc - [R]|{P}</option> <option value="[X]__pc__[D]">aspn - [X]|[D]</option> - <option value="[FLMWY]__pc__{P}">chymotrypsin - [FLMWY]|{P}</option> + <option value="[FLWY]__pc__{P}">chymotrypsin - [FLWY]|{P}</option> <option value="[R]__pc__[X]">clostripain - [R]|[X]</option> <option value="[M]__pc__{X}">cnbr - [M]|{X}</option> <option value="[AGILV]__pc__{P}">elastase - [AGILV]|{P}</option>