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comparison test-data/augustus_sample.gff @ 0:956bfab63005 draft default tip

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planemo upload for repository https://github.com/iracooke/protk-galaxytools/blob/master/protk-proteogenomics/.shed.yml commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
author iracooke
date Tue, 20 Oct 2015 20:36:03 -0400
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-1:000000000000 0:956bfab63005
1 ##gff-version 3
2 # This output was generated with AUGUSTUS (version 2.5.5).
3 # AUGUSTUS is a gene prediction tool for eukaryotes written by Mario Stanke (mario.stanke@uni-greifswald.de)
4 # and Oliver Keller (keller@cs.uni-goettingen.de).
5 # Please cite: Mario Stanke, Mark Diekhans, Robert Baertsch, David Haussler (2008),
6 # Using native and syntenically mapped cDNA alignments to improve de novo gene finding
7 # Bioinformatics 24: 637-644, doi 10.1093/bioinformatics/btn013
8 # No extrinsic information on sequences given.
9 # Initialising the parameters ...
10 # venturia_inaequalis version. Use default transition matrix.
11 # Looks like /home/virtualdan/winshare/vp/final_vp_assembly/Pirina.100.fasta is in fasta format.
12 # We have hints for 0 sequences and for 0 of the sequences in the input set.
13 #
14 # ----- prediction on sequence number 1 (length = 532736, name = scaffold14) -----
15 #
16 # Predicted genes for sequence number 1 on both strands
17 # start gene g1
18 scaffold14 AUGUSTUS gene 2517 3803 . - . ID=g1
19 scaffold14 AUGUSTUS transcript 2517 3803 0.92 - . ID=g1.t1;Parent=g1
20 scaffold14 AUGUSTUS stop_codon 2517 2519 . - 0 Parent=g1.t1
21 scaffold14 AUGUSTUS CDS 2517 3803 0.92 - 0 ID=g1.t1.cds;Parent=g1.t1
22 scaffold14 AUGUSTUS start_codon 3801 3803 . - 0 Parent=g1.t1
23 # coding sequence = [atggcagggctagcagcaggcattgttggtgtcgtgtcagctggtaccaaagtcgccatcgtcctttcgcagtatggca
24 # atgaagtgggagcagctggccaagaagcgcgaatgatcgcgtcggaaatccgaggatcatgcacagttctcacgaccctccactcgacattgaaacat
25 # gtccagacatcgccgtactacgcgaattgcgctgaactgatcagcgatatgaccgatgcgagtctggagatgtatacggaaatcatggaggtcgtcga
26 # gggattgtcggcaatgacgagcgacagcaagatgaatttgaggaagcggctgctgtggacctttcaaaagccgaagatcgttatgttgagaacggcac
27 # tggaggcctatagatcgaatttggctcttatgcttggaacgttggatatggctgagaaggcctcgcgaagctacgttgctttgactgaggagattgtg
28 # caggaagatgaaatggactgcgcaaagcttcaagacctacaactggaacaacaaatgtctctgcttaaggttcaagagttggacccggaaagtatcga
29 # gcttccgcctagcccaacgggcgcagggcggggattttgggggtcgtcaaataaagaatctgcatttccagtcgaggagggttatgtcagtgccctga
30 # gagaagagattgcgactctcaagaggagccgaactgtctacctgacagaccccgaaaaggtgcgcgatcgagtagctcgacagagcaatcgtttgtcc
31 # caactcctcgtccaggatcagaggagaatttcgcgaagatggtctcaatccctgccagagagacgtatgagcatgtacagcgacttggcagcagagag
32 # gtcacggtcgcctacgagtacgcctggcagctcatcagcctccccgagcgaatccagcgatgatctatccagcgattatgcccaggtgaacgaaccca
33 # tggttagagacttttatgcttggatgtctgcgcaaactggcgttcagcggagcattgtgcttcgacagctgcaagcgcggtttggtgatgggcgaggg
34 # acaactgtccgcaagcccgtcaacggtgttggaatccatccaggagcaagcgaggacacactatgcgccgatgtctccaagcttgaattggagaagga
35 # tgcagttgcagcagagacctacgagagacaggctgagccagctcctgtggttggagccagtaaggaaaagaagagctcgttcttgaagaggtcaatgg
36 # ggttgaaaagacgaacgccgtcagcgtcgtga]
37 # protein sequence = [MAGLAAGIVGVVSAGTKVAIVLSQYGNEVGAAGQEARMIASEIRGSCTVLTTLHSTLKHVQTSPYYANCAELISDMTD
38 # ASLEMYTEIMEVVEGLSAMTSDSKMNLRKRLLWTFQKPKIVMLRTALEAYRSNLALMLGTLDMAEKASRSYVALTEEIVQEDEMDCAKLQDLQLEQQM
39 # SLLKVQELDPESIELPPSPTGAGRGFWGSSNKESAFPVEEGYVSALREEIATLKRSRTVYLTDPEKVRDRVARQSNRLSQLLVQDQRRISRRWSQSLP
40 # ERRMSMYSDLAAERSRSPTSTPGSSSASPSESSDDLSSDYAQVNEPMVRDFYAWMSAQTGVQRSIVLRQLQARFGDGRGTTVRKPVNGVGIHPGASED
41 # TLCADVSKLELEKDAVAAETYERQAEPAPVVGASKEKKSSFLKRSMGLKRRTPSAS]
42 # end gene g1
43 ###
44 # start gene g2
45 scaffold14 AUGUSTUS gene 6798 7541 . - . ID=g2
46 scaffold14 AUGUSTUS transcript 6798 7541 0.56 - . ID=g2.t1;Parent=g2
47 scaffold14 AUGUSTUS stop_codon 6798 6800 . - 0 Parent=g2.t1
48 scaffold14 AUGUSTUS intron 6936 6986 1 - . Parent=g2.t1
49 scaffold14 AUGUSTUS intron 7068 7117 1 - . Parent=g2.t1
50 scaffold14 AUGUSTUS intron 7275 7401 0.63 - . Parent=g2.t1
51 scaffold14 AUGUSTUS CDS 6798 6935 0.97 - 0 ID=g2.t1.cds;Parent=g2.t1
52 scaffold14 AUGUSTUS CDS 6987 7067 1 - 0 ID=g2.t1.cds;Parent=g2.t1
53 scaffold14 AUGUSTUS CDS 7118 7274 1 - 1 ID=g2.t1.cds;Parent=g2.t1
54 scaffold14 AUGUSTUS CDS 7402 7541 0.59 - 0 ID=g2.t1.cds;Parent=g2.t1
55 scaffold14 AUGUSTUS start_codon 7539 7541 . - 0 Parent=g2.t1
56 # coding sequence = [atgcctaccagattatccaacacccgcaagcaccgcggtcacgtctctgccggtcacggtcgtgtcggcaagcagtatg
57 # tcacacccctcagcaaccctctcctcgacgttgaacggatcttccaattttcgccattgcaccgcaagcatcccggtggtcgtggtctcgctggtggt
58 # cagcaccaccacaggaccaacatggataaataccatccaggttacttcggaaaggtcggtatgcgatacttccacaagcaaggcaaccacttctggaa
59 # gccaaccatcaacttggacaagctttggtccctcgttcctctcgagcagcgcgaaaagtacatctccaacaagaagtccgacacagctccagttctcg
60 # acctcctctccttcggttactcaaaggtcctcggaaagggtcgtctcccagaaatcccactcgtcgtccgcgcccgatacttctccgcagaagccgaa
61 # aagaagatcaaggaagctggcggagtcgtccagttggtcggttag]
62 # protein sequence = [MPTRLSNTRKHRGHVSAGHGRVGKQYVTPLSNPLLDVERIFQFSPLHRKHPGGRGLAGGQHHHRTNMDKYHPGYFGKV
63 # GMRYFHKQGNHFWKPTINLDKLWSLVPLEQREKYISNKKSDTAPVLDLLSFGYSKVLGKGRLPEIPLVVRARYFSAEAEKKIKEAGGVVQLVG]
64 scaffold14 AUGUSTUS transcript 6798 7541 0.32 - . ID=g2.t2;Parent=g2
65 scaffold14 AUGUSTUS stop_codon 6798 6800 . - 0 Parent=g2.t2
66 scaffold14 AUGUSTUS intron 6936 6986 1 - . Parent=g2.t2
67 scaffold14 AUGUSTUS intron 7068 7117 1 - . Parent=g2.t2
68 scaffold14 AUGUSTUS intron 7275 7467 0.37 - . Parent=g2.t2
69 scaffold14 AUGUSTUS CDS 6798 6935 0.97 - 0 ID=g2.t2.cds;Parent=g2.t2
70 scaffold14 AUGUSTUS CDS 6987 7067 1 - 0 ID=g2.t2.cds;Parent=g2.t2
71 scaffold14 AUGUSTUS CDS 7118 7274 1 - 1 ID=g2.t2.cds;Parent=g2.t2
72 scaffold14 AUGUSTUS CDS 7468 7541 0.33 - 0 ID=g2.t2.cds;Parent=g2.t2
73 scaffold14 AUGUSTUS start_codon 7539 7541 . - 0 Parent=g2.t2
74 # coding sequence = [atgcctaccagattatccaacacccgcaagcaccgcggtcacgtctctgccggtcacggtcgtgtcggcaagcaccgca
75 # agcatcccggtggtcgtggtctcgctggtggtcagcaccaccacaggaccaacatggataaataccatccaggttacttcggaaaggtcggtatgcga
76 # tacttccacaagcaaggcaaccacttctggaagccaaccatcaacttggacaagctttggtccctcgttcctctcgagcagcgcgaaaagtacatctc
77 # caacaagaagtccgacacagctccagttctcgacctcctctccttcggttactcaaaggtcctcggaaagggtcgtctcccagaaatcccactcgtcg
78 # tccgcgcccgatacttctccgcagaagccgaaaagaagatcaaggaagctggcggagtcgtccagttggtcggttag]
79 # protein sequence = [MPTRLSNTRKHRGHVSAGHGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHPGYFGKVGMRYFHKQGNHFWKPTINLDKL
80 # WSLVPLEQREKYISNKKSDTAPVLDLLSFGYSKVLGKGRLPEIPLVVRARYFSAEAEKKIKEAGGVVQLVG]
81 # end gene g2
82 ###
83 # start gene g3
84 scaffold14 AUGUSTUS gene 8211 8576 0.98 + . ID=g3
85 scaffold14 AUGUSTUS transcript 8211 8576 0.98 + . ID=g3.t1;Parent=g3
86 scaffold14 AUGUSTUS start_codon 8211 8213 . + 0 Parent=g3.t1
87 scaffold14 AUGUSTUS CDS 8211 8576 0.98 + 0 ID=g3.t1.cds;Parent=g3.t1
88 scaffold14 AUGUSTUS stop_codon 8574 8576 . + 0 Parent=g3.t1
89 # coding sequence = [atgtcaaaacaactctccacaaaggaagtttccacacacaaatcagtcgaagagggtctctggatcataatcgacaacg
90 # aagtctacgacgtcacaaaattcatcgaagaacaccccggcggtccaaagatcctaaagcgcgtcggtgggaaagatgccagcaagcaattctggaag
91 # gcaagcaatcccatccccttacaaccatctcaccaaaaacatccactctcacaccctctaccatcatctgttcttataggtgcacgtgtgctaacctt
92 # atccgcgtcacagtaccacagcgacaacgtcctaaaaaaatacaaacctaaactcatgatcggaagcgtcaaagaagacgccaagttatag]
93 # protein sequence = [MSKQLSTKEVSTHKSVEEGLWIIIDNEVYDVTKFIEEHPGGPKILKRVGGKDASKQFWKASNPIPLQPSHQKHPLSHP
94 # LPSSVLIGARVLTLSASQYHSDNVLKKYKPKLMIGSVKEDAKL]
95 # end gene g3
96 ###
97 # start gene g4
98 scaffold14 AUGUSTUS gene 9661 12081 . - . ID=g4
99 scaffold14 AUGUSTUS transcript 9661 12081 0.96 - . ID=g4.t1;Parent=g4
100 scaffold14 AUGUSTUS stop_codon 9661 9663 . - 0 Parent=g4.t1
101 scaffold14 AUGUSTUS intron 10248 10299 0.97 - . Parent=g4.t1
102 scaffold14 AUGUSTUS intron 10533 10666 0.99 - . Parent=g4.t1
103 scaffold14 AUGUSTUS CDS 9661 10247 0.97 - 2 ID=g4.t1.cds;Parent=g4.t1
104 scaffold14 AUGUSTUS CDS 10300 10532 0.98 - 1 ID=g4.t1.cds;Parent=g4.t1
105 scaffold14 AUGUSTUS CDS 10667 12081 0.98 - 0 ID=g4.t1.cds;Parent=g4.t1
106 scaffold14 AUGUSTUS start_codon 12079 12081 . - 0 Parent=g4.t1
107 # coding sequence = [atggagacctatcaaggcaaggtccagacgccgcaggacgccatcatccttttcgaagcatgtcgactaggcctcacac
108 # cgcgtgtgcagaggagactatcggagaaggagaggcaacagatcaaatctggctcggtattcgtgtgggatgaacgcgaagctggcatgaggaggtgg
109 # actgacgggaaatcatggagcgcaagtcgcgtatctggtagctttctcacctatcgcgaaatggaaggaaagagaggagggactggcctgcctgcagg
110 # cgctacaccacctgctctcaggaagtcaagcagtggaacgagaagctccgccaactcgaacaatggcggttcagaggacgacgaggaaggaccagacg
111 # ggtacaagtacaaggccgacggactcatgaaacagtctttcagtatcaccacctcagacggccgacatcttcacctcatcagctacttcgcaagaaat
112 # cctgcacatccattaaaacaaccatccacggatccgcaactgcgcaatattgttccgcaaaaaggcatgtaccccgaggctacagtcaatgaagccac
113 # gaacataccccctgtcactcgaggacctatgggggggacatcgccgcatcctcctgcgcatccgcctccacagatgtacgtcgcagcctatccatttc
114 # caccgcctccaggataccaagcaggaccaatgcatcatcactaccctccacaaggctggccgccaagcccgggacatctaggccctggaggagtacca
115 # cctggagcattttattatcctgctcctcctccgggatatgtttatccgaattcaccatacgcgccatccccatatccgtatggccaccctcctccgca
116 # cgcgcaggagagaggtccacctccgccgcctcaatcaagtctgccccctctgagtggcccgatacatccctctgctgggcaatgggcccctccagctg
117 # cgcgtacatcctcggccacgtatgcgcaaagcaggcctcctacatccttgcaagagagctacagccgctcggcagcagaacagagacaagaagagaca
118 # tcgcgcgctcctggtccgcagctagcacccgtagttgccttccagaacaaacctccgactccaccagagagcaggaatggcgcgacaccgcctgcgaa
119 # gagctacccaaccgaccctctaccaacccgcgaaactaatactactactggacctacaaagacctttcccagtatcaaagcattgattaacggcgatg
120 # tgataacatcgagacgagaagaggaccggacacgcactcgatctcgcagtcgaagcccgctaggaagcagaatccgcgatgttcccagtgcgatggca
121 # gccggaggccgagagagagaccgtagcgatttgaagaggttggatgcccaacttctcaaatcttctggtctcgagtcttcagatggcaacgggaagct
122 # tgcacaaaaccaccctggtgcacacagcaagccaatttcgagaagtatcgatgttattgcaaaagtcatccccggtcatgttcttgccacgatgcctg
123 # aaaatatcgaacttgaacctcaagacttcggaagatggccactacaatcgggtaacggacggtatacggagatacagccaaccccaacaagttccgaa
124 # gatgggcaaaagctgcaacttcagacgatgcccgacgataacttcgggcgggttatggaacctagcctgaaggaagttcttgatggcatgactggaag
125 # acagcgaggtctgggccagctcgggcaaatgcgtcttactactcaagatgtcaatagcaaacgatttgatctgtaccaagctctcaaatacgctacac
126 # catcatccaccatcactcggattttgaatgaattgaagactggtgtcctgccctcagaaaagttgctgcgagaaacgaatatcggcgtggaagttgac
127 # gggctgcgctggttgacaaaaatcccagttatcgcaaagctcagcaccgagatcgtcaatgaatggcgcactgttatagagtctggtcctcgtcctca
128 # tccctcaaacgatgagatctttgggccttactggcggcttagcaacaatttttacgtttctaatcatggcagcgagagcccgtttcccagactatcac
129 # ttggaaacgagaagcttggtcttggttccctgaacgacaacaagaatctcggaacagaaaatggaatgatacccaagaccaaggaggataggttataa]
130 # protein sequence = [METYQGKVQTPQDAIILFEACRLGLTPRVQRRLSEKERQQIKSGSVFVWDEREAGMRRWTDGKSWSASRVSGSFLTYR
131 # EMEGKRGGTGLPAGATPPALRKSSSGTRSSANSNNGGSEDDEEGPDGYKYKADGLMKQSFSITTSDGRHLHLISYFARNPAHPLKQPSTDPQLRNIVP
132 # QKGMYPEATVNEATNIPPVTRGPMGGTSPHPPAHPPPQMYVAAYPFPPPPGYQAGPMHHHYPPQGWPPSPGHLGPGGVPPGAFYYPAPPPGYVYPNSP
133 # YAPSPYPYGHPPPHAQERGPPPPPQSSLPPLSGPIHPSAGQWAPPAARTSSATYAQSRPPTSLQESYSRSAAEQRQEETSRAPGPQLAPVVAFQNKPP
134 # TPPESRNGATPPAKSYPTDPLPTRETNTTTGPTKTFPSIKALINGDVITSRREEDRTRTRSRSRSPLGSRIRDVPSAMAAGGRERDRSDLKRLDAQLL
135 # KSSGLESSDGNGKLAQNHPGAHSKPISRSIDVIAKVIPGHVLATMPENIELEPQDFGRWPLQSGNGRYTEIQPTPTSSEDGQKLQLQTMPDDNFGRVM
136 # EPSLKEVLDGMTGRQRGLGQLGQMRLTTQDVNSKRFDLYQALKYATPSSTITRILNELKTGVLPSEKLLRETNIGVEVDGLRWLTKIPVIAKLSTEIV
137 # NEWRTVIESGPRPHPSNDEIFGPYWRLSNNFYVSNHGSESPFPRLSLGNEKLGLGSLNDNKNLGTENGMIPKTKEDRL]
138 # end gene g4
139 ###
140 # start gene g5
141 scaffold14 AUGUSTUS gene 11112 11486 0.43 + . ID=g5
142 scaffold14 AUGUSTUS transcript 11112 11486 0.43 + . ID=g5.t1;Parent=g5
143 scaffold14 AUGUSTUS start_codon 11112 11114 . + 0 Parent=g5.t1
144 scaffold14 AUGUSTUS CDS 11112 11486 0.43 + 0 ID=g5.t1.cds;Parent=g5.t1
145 scaffold14 AUGUSTUS stop_codon 11484 11486 . + 0 Parent=g5.t1
146 # coding sequence = [atgtacgcgcagctggaggggcccattgcccagcagagggatgtatcgggccactcagagggggcagacttgattgagg
147 # cggcggaggtggacctctctcctgcgcgtgcggaggagggtggccatacggatatggggatggcgcgtatggtgaattcggataaacatatcccggag
148 # gaggagcaggataataaaatgctccaggtggtactcctccagggcctagatgtcccgggcttggcggccagccttgtggagggtagtgatgatgcatt
149 # ggtcctgcttggtatcctggaggcggtggaaatggataggctgcgacgtacatctgtggaggcggatgcgcaggaggatgcggcgatgtcccccccat
150 # ag]
151 # protein sequence = [MYAQLEGPIAQQRDVSGHSEGADLIEAAEVDLSPARAEEGGHTDMGMARMVNSDKHIPEEEQDNKMLQVVLLQGLDVP
152 # GLAASLVEGSDDALVLLGILEAVEMDRLRRTSVEADAQEDAAMSPP]
153 # end gene g5
154 ###
155 # start gene g6
156 scaffold14 AUGUSTUS gene 22383 25038 0.97 + . ID=g6
157 scaffold14 AUGUSTUS transcript 22383 25038 0.97 + . ID=g6.t1;Parent=g6
158 scaffold14 AUGUSTUS start_codon 22383 22385 . + 0 Parent=g6.t1
159 scaffold14 AUGUSTUS intron 22637 22690 1 + . Parent=g6.t1
160 scaffold14 AUGUSTUS intron 22778 22830 1 + . Parent=g6.t1
161 scaffold14 AUGUSTUS intron 24145 24194 1 + . Parent=g6.t1
162 scaffold14 AUGUSTUS CDS 22383 22636 0.97 + 0 ID=g6.t1.cds;Parent=g6.t1
163 scaffold14 AUGUSTUS CDS 22691 22777 1 + 1 ID=g6.t1.cds;Parent=g6.t1
164 scaffold14 AUGUSTUS CDS 22831 24144 1 + 1 ID=g6.t1.cds;Parent=g6.t1
165 scaffold14 AUGUSTUS CDS 24195 25038 1 + 1 ID=g6.t1.cds;Parent=g6.t1
166 scaffold14 AUGUSTUS stop_codon 25036 25038 . + 0 Parent=g6.t1
167 # coding sequence = [atgttgatcaggtcaaatccctccttgcattaccccattacaatcacgaagctcctggcgaaaccggatcagtccgtcg
168 # acaggttcgctccgcttttctcctacacttataagactaccgtcactgaaggcaataagtatggcgatgagccaattcagttccagaaggacttcccc
169 # gccgagtttcagtccgagcttgagggtaccctacgcgtttggaagataaagcccggcgatgttctgtacgaatctggaattcaactagtcgacattga
170 # cgagccatgcactcacgatactgtttttggtggcctatgtgcgaattgtggccaagaaatggacaaactagataactatctaaccaccgagagagcct
171 # cccaacgcgccaccgtttttgcctcccacggaaacacagctctcctagtcagcaagaaggaagcaggtcggatcaatgaagaggctaaaagacgtctc
172 # ttacagggtcgcaagctttcactagttgtggatctggatcaaaccatcattcacgccactgtcgatccaactgtggctgaatggcagcaggaccccgc
173 # caacccaaactacgaggccgtaaagggggtgagacaattccagctggtagatgatggacctggaggtcgtggttgtaattactacatcaaattgcgac
174 # ccggtctggaagagtttctggaagatatcgcgaagaagtacgaacttcacatctacaccatgggaaccagggcatacgcgcaaaagatcgctgagatt
175 # gttgacccacaaaggagattttttggtgacaggatactcagcagagacgaaagtggaagcttgacgaacaagactttgcagcgcatatttcccgtcga
176 # cacagacatggttgtcattattgacgatcgtggagatgtttggcaatggagtcccaacttaatcaaagtcactccctacgacttcttcgtcggaattg
177 # gtgacatcaattctagctttttgccgaagaagaccgacagcatttccaaaaggactaggacacccccacccccaccgcctccagccgaaataccagag
178 # gacaaggagactaatgatagctttgaagaagcggagtcccccaccaacggtctagcaattgacacgaccgttatactggaagactccgatgcgccgac
179 # cttggagacacagcttgtagctatggcaggaggagacgacccctccatcatagaagagaaaagtaatacacaggcggagacattagcggcgcaagtca
180 # cagatcgccctttgatgaagaagcaggaaatgctagacaagcttgatgaagaggaggaagccaaagaaaacagtgaagaggagcgacctgtggaaacc
181 # acacccgataccaaacaacgccacaatcttctacacgatgatgatgacgaattgcgacatcttcaggccaatctggagagcatccaccgactgtttta
182 # tgaagaatacgaccagaatatcatagcaagtccgccgaggctttctcagcttcggggcgagagatcagcgaaaaagactccggtcgacaaccttgagc
183 # tcgtgccggacgtcaaagatatcatgccacggatgaaattggatgttttgaaacatgtggtcatatgcttcacgggggtcattcctcaaggcttaaac
184 # catgaaacatctgacattggcatgtgggcacgatcttttggagccagggtgtcaccaaatttgacaaagtcgaccacgcatgttgttgcccacaaaga
185 # tcgacgaacaagtaaagttcgacaggcggcaaggcatccgaacatcaaaatcgtcgcaaccagctggctactcgaatgctttgtgcagtgggttgcgg
186 # ctcctgagggaccgcatacgatcaaagtggagagcgacgagcatgatgctcatgactcgctgccattcgaggagctagaagaggcttcgatgttaact
187 # ccatcagaagacggaggcgcggacgatgctgtcttgccttcggaagtggaggaagcggacgaagaacccaattccccagtcttggacatactagaaaa
188 # cgtcgaatggggtgatctagaagatgaaatgaaagacttctacgactcggaggacgaaactgaagctgaagataccgatgaaggccatgacgaaggca
189 # tggagtcagatgcaagcgggaaaagtggacgcagctcacgaagcacctcgtcacgaaaagctaaacgcaagcgaaggacggaatcggttaacggcgac
190 # tatgaagaagcgggcgaaagcacatcggcgttgcagaagcgacggaaaatggcggcagagcgtactacaggacttgccaacgtggagacgttggagaa
191 # tccaagtgggctacccagccccgacacgacaggaccagaggaggaagcaggagagaaggacaaaggcttatcgaatggcgcagaaggcgatgtgagcg
192 # atgacattgatgaattcgagaaagacatgatggcaatgttcgacaaggacagtgatgccgaggattag]
193 # protein sequence = [MLIRSNPSLHYPITITKLLAKPDQSVDRFAPLFSYTYKTTVTEGNKYGDEPIQFQKDFPAEFQSELEGTLRVWKIKPG
194 # DVLYESGIQLVDIDEPCTHDTVFGGLCANCGQEMDKLDNYLTTERASQRATVFASHGNTALLVSKKEAGRINEEAKRRLLQGRKLSLVVDLDQTIIHA
195 # TVDPTVAEWQQDPANPNYEAVKGVRQFQLVDDGPGGRGCNYYIKLRPGLEEFLEDIAKKYELHIYTMGTRAYAQKIAEIVDPQRRFFGDRILSRDESG
196 # SLTNKTLQRIFPVDTDMVVIIDDRGDVWQWSPNLIKVTPYDFFVGIGDINSSFLPKKTDSISKRTRTPPPPPPPAEIPEDKETNDSFEEAESPTNGLA
197 # IDTTVILEDSDAPTLETQLVAMAGGDDPSIIEEKSNTQAETLAAQVTDRPLMKKQEMLDKLDEEEEAKENSEEERPVETTPDTKQRHNLLHDDDDELR
198 # HLQANLESIHRLFYEEYDQNIIASPPRLSQLRGERSAKKTPVDNLELVPDVKDIMPRMKLDVLKHVVICFTGVIPQGLNHETSDIGMWARSFGARVSP
199 # NLTKSTTHVVAHKDRRTSKVRQAARHPNIKIVATSWLLECFVQWVAAPEGPHTIKVESDEHDAHDSLPFEELEEASMLTPSEDGGADDAVLPSEVEEA
200 # DEEPNSPVLDILENVEWGDLEDEMKDFYDSEDETEAEDTDEGHDEGMESDASGKSGRSSRSTSSRKAKRKRRTESVNGDYEEAGESTSALQKRRKMAA
201 # ERTTGLANVETLENPSGLPSPDTTGPEEEAGEKDKGLSNGAEGDVSDDIDEFEKDMMAMFDKDSDAED]
202 # end gene g6
203 ###
204 # start gene g7
205 scaffold14 AUGUSTUS gene 25584 27469 0.98 + . ID=g7
206 scaffold14 AUGUSTUS transcript 25584 27469 0.98 + . ID=g7.t1;Parent=g7
207 scaffold14 AUGUSTUS start_codon 25584 25586 . + 0 Parent=g7.t1
208 scaffold14 AUGUSTUS intron 25737 25813 0.99 + . Parent=g7.t1
209 scaffold14 AUGUSTUS intron 26987 27043 1 + . Parent=g7.t1
210 scaffold14 AUGUSTUS CDS 25584 25736 0.98 + 0 ID=g7.t1.cds;Parent=g7.t1
211 scaffold14 AUGUSTUS CDS 25814 26986 1 + 0 ID=g7.t1.cds;Parent=g7.t1
212 scaffold14 AUGUSTUS CDS 27044 27469 1 + 0 ID=g7.t1.cds;Parent=g7.t1
213 scaffold14 AUGUSTUS stop_codon 27467 27469 . + 0 Parent=g7.t1
214 # coding sequence = [atgaccacagacaaccccgaggctaagatggtggaagtggctcagccaacgaagatggccgtcgtgccagtcgagaagg
215 # aggttccgaaacgtccttccaagttgcgcttcatggacctctcggtcgacatcaagacattgattgtcagccatgtccatcggccaaccgaactcaag
216 # aatctctgcctcacctgctcgcagatgcacaagattaccgtccggaaactgtatcacgaagtcacgctagaggtcggttcgtctaccgatgccaaact
217 # cacctccttcatcaatccccgcaatatcggcctccctcacattcggaagctcgacctatacctggctgaggttgccgacaagtgcaaccagctacaac
218 # aggctcactttgccatacggatgatactagagttccttccagaaaacatactcgagaaattctcatggcatccttggtcgcctttcctggccgacaat
219 # ttggttctactgtacaagaagcagcgacggatggagtggttagaaggcatagctctggataggaatgttctacccgagttggaaaagcaatccgactt
220 # tgaccagatattcacaaggacgcggcggctaggactatatccggattcgcgagatgtgctcaatttctgcgccaatctgatcaagcggacaaaaaagg
221 # tcgagaagattacgctgcatgctagtttcgatgaggactcagatcggactccaattcctagccgggagctgaatgactccagcacagatcttggtttg
222 # ataactaggaccatgttcggccatatggagccattcgagaaatgcacacctctgtcgttgaaggatcttacactgcaaaagatcaatctccgttatgc
223 # cgccaattcgtattgcaaattcattgatttccgcgtcatgaaggcgctccgtatatttgggtgtccgggtgccgactccctctttgccgagctatcaa
224 # aatcgcataagttaccagagcgcttggagactctcgaattcaagcacgatgataaccaagaaaacgacgcattgaatgctttggacggcttcttgaaa
225 # ctggtttctggcatcaaagtgctcaccatggatatctgctatgcaaagcaattaccgagcgcagatggaatcattcggcattctcgaacgttgaggga
226 # attgaatgtgcacggctctcgtggagacggagaggaagaggaacttatcattgactttgacgatttcgagaagatatgcaagtcttgctcgtcaattg
227 # aacagctgtcaatggcgttcccgacgaccagtctgatccgaccgatttcagactcatttcaagcattcgagaacgcgttgggagatctcgcgaacctg
228 # attactctcaacataacgacctggcctacgaacacaccgtctacctcccgcctcccacgtaaaacctacgaaatcctcctccaatccctcgcaaactc
229 # gggtttcgaacactcgatccaccacgcatcctcgcgcacccctcctcggtcctcgaaactcgccgtcatcgctttcggttcctctgatcgcgtatacg
230 # atcgcgaagactccaagaaccagattatatttgtgaagggtaggcagactgatcctttcggaggggaaaagccattggcggtgcaggtcggttggtgt
231 # ctaaggaagtttgtggagccgaggagtgatgtgcttgatttctcgttggcgaggagttgtagaccgcctactagggaaccgccggcgagtgaggatag
232 # tgagtaa]
233 # protein sequence = [MTTDNPEAKMVEVAQPTKMAVVPVEKEVPKRPSKLRFMDLSVDIKTLIVSHVHRPTELKNLCLTCSQMHKITVRKLYH
234 # EVTLEVGSSTDAKLTSFINPRNIGLPHIRKLDLYLAEVADKCNQLQQAHFAIRMILEFLPENILEKFSWHPWSPFLADNLVLLYKKQRRMEWLEGIAL
235 # DRNVLPELEKQSDFDQIFTRTRRLGLYPDSRDVLNFCANLIKRTKKVEKITLHASFDEDSDRTPIPSRELNDSSTDLGLITRTMFGHMEPFEKCTPLS
236 # LKDLTLQKINLRYAANSYCKFIDFRVMKALRIFGCPGADSLFAELSKSHKLPERLETLEFKHDDNQENDALNALDGFLKLVSGIKVLTMDICYAKQLP
237 # SADGIIRHSRTLRELNVHGSRGDGEEEELIIDFDDFEKICKSCSSIEQLSMAFPTTSLIRPISDSFQAFENALGDLANLITLNITTWPTNTPSTSRLP
238 # RKTYEILLQSLANSGFEHSIHHASSRTPPRSSKLAVIAFGSSDRVYDREDSKNQIIFVKGRQTDPFGGEKPLAVQVGWCLRKFVEPRSDVLDFSLARS
239 # CRPPTREPPASEDSE]
240 # end gene g7
241 ###
242 # start gene g8
243 scaffold14 AUGUSTUS gene 29180 30106 . - . ID=g8
244 scaffold14 AUGUSTUS transcript 29180 30106 0.76 - . ID=g8.t1;Parent=g8
245 scaffold14 AUGUSTUS stop_codon 29180 29182 . - 0 Parent=g8.t1
246 scaffold14 AUGUSTUS CDS 29180 30106 0.76 - 0 ID=g8.t1.cds;Parent=g8.t1
247 scaffold14 AUGUSTUS start_codon 30104 30106 . - 0 Parent=g8.t1
248 # coding sequence = [atgttccgagctcgcgacagtctgcgcaagctacgtagccagggtcttccatcaaccaaaatttggctccctactccta
249 # gaagccagagacttctagcatccttcgccaaatctcgcaataccttcccatggcattacgctgtccctgcagccatgggcgcggctgtgttctcgttt
250 # gtctttatcgcccaaagtcagaaaggttcactgccgtatccaggaggttgctgttctcgggatcggaagcctctactcgtatcatattacacagataa
251 # accctgcactcttagggatgtgacagatattgcaggtctcatggctgcgatgtgggtatccgagcgcataaacgaacaatcatcatcgaaggatgcac
252 # tcactgtcaaggacgaccttcttttcgatattgctagtcgcttggctttgctcagaaatggcggagtcgagggaagttctctaggaaagacagaatgc
253 # cttcaaatgtttgccgagtcggaatcgaatcgcttgaaagactcaccgtttggtcgagagagttgcgatctcagcctgatgagtggggacgccaaaac
254 # tgcctgggttgctgacagcattgggtacttcatcttttctgaccgcatggatgagccacatccgttatcaaagctggacgactggatagaccacttaa
255 # tcgatcggggttcctttgtggaatcgaagttcatgactgtcttgaatgatgtagagagagtaatcatgattgagatgtacaaggaggctcgaaaggca
256 # tatcaaaatgcagaaactcgcaaggaaatggaagctatgggacttccagttgcgtctgctcaagatatgatgctgatagatgcgatgatgcatgttta
257 # tcggcgactcagcggagatagggttctcaaggacgtgggacacgaagatgatgttggtcattga]
258 # protein sequence = [MFRARDSLRKLRSQGLPSTKIWLPTPRSQRLLASFAKSRNTFPWHYAVPAAMGAAVFSFVFIAQSQKGSLPYPGGCCS
259 # RDRKPLLVSYYTDKPCTLRDVTDIAGLMAAMWVSERINEQSSSKDALTVKDDLLFDIASRLALLRNGGVEGSSLGKTECLQMFAESESNRLKDSPFGR
260 # ESCDLSLMSGDAKTAWVADSIGYFIFSDRMDEPHPLSKLDDWIDHLIDRGSFVESKFMTVLNDVERVIMIEMYKEARKAYQNAETRKEMEAMGLPVAS
261 # AQDMMLIDAMMHVYRRLSGDRVLKDVGHEDDVGH]
262 # end gene g8
263 ###
264 # start gene g9
265 scaffold14 AUGUSTUS gene 30672 31824 1 + . ID=g9
266 scaffold14 AUGUSTUS transcript 30672 31824 1 + . ID=g9.t1;Parent=g9
267 scaffold14 AUGUSTUS start_codon 30672 30674 . + 0 Parent=g9.t1
268 scaffold14 AUGUSTUS intron 31248 31299 1 + . Parent=g9.t1
269 scaffold14 AUGUSTUS CDS 30672 31247 1 + 0 ID=g9.t1.cds;Parent=g9.t1
270 scaffold14 AUGUSTUS CDS 31300 31824 1 + 0 ID=g9.t1.cds;Parent=g9.t1
271 scaffold14 AUGUSTUS stop_codon 31822 31824 . + 0 Parent=g9.t1
272 # coding sequence = [atgccaatcgaaaacatccaaaacccatccgcaaaacactggaactgcacaaacaccctcaacccctccatcctcccct
273 # tccaccaatctctccccgactacgccataaccccgctcacccccctagaagctctagcagaagacctaggtataggccacatctacgtcaaagacgaa
274 # ggcacgcgtttcggtctgcccgccttcaaaatcctaggcgcctcatgggcggtttaccgagccatcgcggctcaattgggtaaaccgacgacaacatc
275 # actggatgatttatgcaatgctgccgaggggaggggaattcgaatcgtcacgacatcagagggaaactggggtcgagcggttgctcgaatggggaggt
276 # atcttggggttgcggttacggtttatgtccctcggtatatggatgaagcgacacgggggaagatttcaagggaaggcgctgaggttatcctacataaa
277 # ggcgaatacgacgattgtctatttacttgtcgacacgtctccgaggaaacgggggctcttcttgttttggatacgagttttgatgggtacacggagat
278 # accgcagtgggtgacggatgggtactcttctatgcttgaagaagtggattcgcaactccgggctgcgattgacagaccggcgacccatgcgattgctt
279 # ctgttggtgtggggtcgtgggctcatgccgtggtggctcattataaatccaaagatccgactgcagctgttgcgactgttgagcctaagacggcgaat
280 # tgtcttgctacctctctcgacgccggcaagattatttcagtcaagactgacgtcaccattatgaacggcatgaattgcggaactgtgtctgacattgc
281 # atggccgtatctgagagatggtgtcgatgcaagtgttaccgtcagtgagatgcaggcacacgaagccgttctgtatctgagagcgcatggcgtgaatg
282 # ctggaccttgtggagcggcaccactcgccgcattgagggagttgaagaagttgaactggcttgggcttgggtcggatagcgtcgtggtactttattgc
283 # acagaggccgcaagagcgtataaggagcctaccagcgagtaa]
284 # protein sequence = [MPIENIQNPSAKHWNCTNTLNPSILPFHQSLPDYAITPLTPLEALAEDLGIGHIYVKDEGTRFGLPAFKILGASWAVY
285 # RAIAAQLGKPTTTSLDDLCNAAEGRGIRIVTTSEGNWGRAVARMGRYLGVAVTVYVPRYMDEATRGKISREGAEVILHKGEYDDCLFTCRHVSEETGA
286 # LLVLDTSFDGYTEIPQWVTDGYSSMLEEVDSQLRAAIDRPATHAIASVGVGSWAHAVVAHYKSKDPTAAVATVEPKTANCLATSLDAGKIISVKTDVT
287 # IMNGMNCGTVSDIAWPYLRDGVDASVTVSEMQAHEAVLYLRAHGVNAGPCGAAPLAALRELKKLNWLGLGSDSVVVLYCTEAARAYKEPTSE]
288 # end gene g9
289 ###
290 # start gene g10
291 scaffold14 AUGUSTUS gene 31923 33129 . - . ID=g10
292 scaffold14 AUGUSTUS transcript 31923 33129 0.76 - . ID=g10.t1;Parent=g10
293 scaffold14 AUGUSTUS stop_codon 31923 31925 . - 0 Parent=g10.t1
294 scaffold14 AUGUSTUS intron 32358 32419 1 - . Parent=g10.t1
295 scaffold14 AUGUSTUS intron 32848 32915 0.99 - . Parent=g10.t1
296 scaffold14 AUGUSTUS CDS 31923 32357 1 - 0 ID=g10.t1.cds;Parent=g10.t1
297 scaffold14 AUGUSTUS CDS 32420 32847 0.94 - 2 ID=g10.t1.cds;Parent=g10.t1
298 scaffold14 AUGUSTUS CDS 32916 33129 0.82 - 0 ID=g10.t1.cds;Parent=g10.t1
299 scaffold14 AUGUSTUS start_codon 33127 33129 . - 0 Parent=g10.t1
300 # coding sequence = [atgtctcaccatgagtcgtacgactcgcacaagatgccaaatatgcatgtgcaacagggtcccgatatggccatgaccg
301 # atgctttgcgtaaacaccttacgcgccacattctatcaccgggacctgtcacgcagcgacggttggattttgagcatgcacgaccgacgtggctgagg
302 # gagatgtttgcagaagccactggtgtctttttctacgtatatcccgggatcgcagcaacagcagctttcatcttgcaaaaagagagccctgctttggg
303 # atccgttttcacgatagggctggcttatggtataggcgtttcccttgggattatttgttgcgcaggtacatcggggggacatttcaatccatccatca
304 # ccatctgcttcgccatttggcaaggatttccgtggagaaaggtgccctactacattttcgcgcagatagctggcgccttcttcgccggcttgattctg
305 # tacgggcagtaccatcagcaaatcgaggtttatagattgggactggagaagttggggatgcctgaggtttttatggggagtccggccagtatttttac
306 # gtcatatccgctggggagtcagacgaatcaggcatggttggttttgattgagttttttgttgatgcgtttcttggcttcgccatctgggccgtcctcg
307 # atccatctaatcccttcatctcagctggcatcgcaccattcgtcatcggtctcgcctacagtctcatgatatggggttttgcaagcgtaaccatcagt
308 # accaatcttgcccgagatctaggcgggcgccttgtagccatgttgttttacggttccgatgccttcacgtacatgtcatattggtggattggcatctt
309 # catcaatatacctgccacgatttttgcgacgtgcttttacgagttggtgtttcgggatagtttggataagattgcgcttggacatgcgcagcatgagg
310 # atggagtggatgggattgcgagacatttgagtcagacggggttgatggatccgtatccagaggagagctcgttgaggaggaaggagtatgcgagtcag
311 # tcttcgaggatatcttga]
312 # protein sequence = [MSHHESYDSHKMPNMHVQQGPDMAMTDALRKHLTRHILSPGPVTQRRLDFEHARPTWLREMFAEATGVFFYVYPGIAA
313 # TAAFILQKESPALGSVFTIGLAYGIGVSLGIICCAGTSGGHFNPSITICFAIWQGFPWRKVPYYIFAQIAGAFFAGLILYGQYHQQIEVYRLGLEKLG
314 # MPEVFMGSPASIFTSYPLGSQTNQAWLVLIEFFVDAFLGFAIWAVLDPSNPFISAGIAPFVIGLAYSLMIWGFASVTISTNLARDLGGRLVAMLFYGS
315 # DAFTYMSYWWIGIFINIPATIFATCFYELVFRDSLDKIALGHAQHEDGVDGIARHLSQTGLMDPYPEESSLRRKEYASQSSRIS]
316 scaffold14 AUGUSTUS transcript 31923 33087 0.11 - . ID=g10.t2;Parent=g10
317 scaffold14 AUGUSTUS stop_codon 31923 31925 . - 0 Parent=g10.t2
318 scaffold14 AUGUSTUS intron 32358 32419 1 - . Parent=g10.t2
319 scaffold14 AUGUSTUS intron 32848 32915 0.99 - . Parent=g10.t2
320 scaffold14 AUGUSTUS CDS 31923 32357 1 - 0 ID=g10.t2.cds;Parent=g10.t2
321 scaffold14 AUGUSTUS CDS 32420 32847 0.94 - 2 ID=g10.t2.cds;Parent=g10.t2
322 scaffold14 AUGUSTUS CDS 32916 33087 0.11 - 0 ID=g10.t2.cds;Parent=g10.t2
323 scaffold14 AUGUSTUS start_codon 33085 33087 . - 0 Parent=g10.t2
324 # coding sequence = [atgcatgtgcaacagggtcccgatatggccatgaccgatgctttgcgtaaacaccttacgcgccacattctatcaccgg
325 # gacctgtcacgcagcgacggttggattttgagcatgcacgaccgacgtggctgagggagatgtttgcagaagccactggtgtctttttctacgtatat
326 # cccgggatcgcagcaacagcagctttcatcttgcaaaaagagagccctgctttgggatccgttttcacgatagggctggcttatggtataggcgtttc
327 # ccttgggattatttgttgcgcaggtacatcggggggacatttcaatccatccatcaccatctgcttcgccatttggcaaggatttccgtggagaaagg
328 # tgccctactacattttcgcgcagatagctggcgccttcttcgccggcttgattctgtacgggcagtaccatcagcaaatcgaggtttatagattggga
329 # ctggagaagttggggatgcctgaggtttttatggggagtccggccagtatttttacgtcatatccgctggggagtcagacgaatcaggcatggttggt
330 # tttgattgagttttttgttgatgcgtttcttggcttcgccatctgggccgtcctcgatccatctaatcccttcatctcagctggcatcgcaccattcg
331 # tcatcggtctcgcctacagtctcatgatatggggttttgcaagcgtaaccatcagtaccaatcttgcccgagatctaggcgggcgccttgtagccatg
332 # ttgttttacggttccgatgccttcacgtacatgtcatattggtggattggcatcttcatcaatatacctgccacgatttttgcgacgtgcttttacga
333 # gttggtgtttcgggatagtttggataagattgcgcttggacatgcgcagcatgaggatggagtggatgggattgcgagacatttgagtcagacggggt
334 # tgatggatccgtatccagaggagagctcgttgaggaggaaggagtatgcgagtcagtcttcgaggatatcttga]
335 # protein sequence = [MHVQQGPDMAMTDALRKHLTRHILSPGPVTQRRLDFEHARPTWLREMFAEATGVFFYVYPGIAATAAFILQKESPALG
336 # SVFTIGLAYGIGVSLGIICCAGTSGGHFNPSITICFAIWQGFPWRKVPYYIFAQIAGAFFAGLILYGQYHQQIEVYRLGLEKLGMPEVFMGSPASIFT
337 # SYPLGSQTNQAWLVLIEFFVDAFLGFAIWAVLDPSNPFISAGIAPFVIGLAYSLMIWGFASVTISTNLARDLGGRLVAMLFYGSDAFTYMSYWWIGIF
338 # INIPATIFATCFYELVFRDSLDKIALGHAQHEDGVDGIARHLSQTGLMDPYPEESSLRRKEYASQSSRIS]
339 # end gene g10
340 ###
341 # start gene g11
342 scaffold14 AUGUSTUS gene 34994 38214 . - . ID=g11
343 scaffold14 AUGUSTUS transcript 34994 38214 0.35 - . ID=g11.t1;Parent=g11
344 scaffold14 AUGUSTUS stop_codon 34994 34996 . - 0 Parent=g11.t1
345 scaffold14 AUGUSTUS intron 35009 35061 1 - . Parent=g11.t1
346 scaffold14 AUGUSTUS intron 35522 35657 0.87 - . Parent=g11.t1
347 scaffold14 AUGUSTUS intron 35799 35851 1 - . Parent=g11.t1
348 scaffold14 AUGUSTUS intron 36061 36125 1 - . Parent=g11.t1
349 scaffold14 AUGUSTUS intron 36290 36340 1 - . Parent=g11.t1
350 scaffold14 AUGUSTUS intron 36978 37202 0.99 - . Parent=g11.t1
351 scaffold14 AUGUSTUS intron 37920 37965 0.89 - . Parent=g11.t1
352 scaffold14 AUGUSTUS intron 38139 38192 0.47 - . Parent=g11.t1
353 scaffold14 AUGUSTUS CDS 34994 35008 1 - 0 ID=g11.t1.cds;Parent=g11.t1
354 scaffold14 AUGUSTUS CDS 35062 35521 1 - 1 ID=g11.t1.cds;Parent=g11.t1
355 scaffold14 AUGUSTUS CDS 35658 35798 0.87 - 1 ID=g11.t1.cds;Parent=g11.t1
356 scaffold14 AUGUSTUS CDS 35852 36060 1 - 0 ID=g11.t1.cds;Parent=g11.t1
357 scaffold14 AUGUSTUS CDS 36126 36289 1 - 2 ID=g11.t1.cds;Parent=g11.t1
358 scaffold14 AUGUSTUS CDS 36341 36977 0.88 - 0 ID=g11.t1.cds;Parent=g11.t1
359 scaffold14 AUGUSTUS CDS 37203 37919 0.89 - 0 ID=g11.t1.cds;Parent=g11.t1
360 scaffold14 AUGUSTUS CDS 37966 38138 0.43 - 2 ID=g11.t1.cds;Parent=g11.t1
361 scaffold14 AUGUSTUS CDS 38193 38214 0.96 - 0 ID=g11.t1.cds;Parent=g11.t1
362 scaffold14 AUGUSTUS start_codon 38212 38214 . - 0 Parent=g11.t1
363 # coding sequence = [atgtctagatactctcgcattgttaacatagacttggtcataggagagagcggccgctacgatgaagacgctcctaacc
364 # gctacagtcggcctgatgcggtgccgcttcaacatattcccagtcatgaggactttgctacggatggacaacattcctacatggatacccgggatcga
365 # ctcgccgcccagccgacctactccgttgataatctagcttactcttatggacttagagaagcatacgagtcaacattccagaacatcccagagcatcc
366 # gggccgccagcattatgattcacatccagctgaagaagcagatccagcgtattatgacgatgatgataccagaccaatgctagatcgtcaccacagta
367 # acgatgccagtagttcttcggtgacactgacagtgcaggtcccgagatgggccaccatccagtatgtcccattgttcaaaggcaacctggttttggac
368 # tgtccagtcccatcaaaattggtcaatcagttggcgacaggggatgaacagcctcgtgaatctacgcacatgagatattcagcagcaacttgcgatcc
369 # cgccgattttcttgacaaccgattcacattgcgccaaaaattatatcaacaaccgagagcagttgaactcttcatcgttgtcacaatgtacaatgaag
370 # acgatgcgctgctggcgagaacattgatagggattttccagaatgtcaattacatggaaagtttgagggatagcacgatgtggggtgctaacgcctgg
371 # aagaagatagtagtgtgcatcgttagtgacggaatcgcgaagatcaatccccgttctgcagcacttcttgctggtctgggtgtctttcagcaaggcat
372 # tgccaaagctaagatcaacaaactcgagaccgaggcccatatattcgagtacacaacgcaaatggaaccagtaatgagaggcgagacagtctccgtcc
373 # agaagggcaacactccggttcaactgctcttctgcttgaagcaaaagaatgcgcagaagatcaattcgcatcgctggttctttcaagcctttggcaga
374 # tgtctcgagcctaatatttgtgtactgctcgatgctggaaccaaacctggtaagcactcgatattcaaactttggaacgttttcgatcgaaacagaca
375 # ttgtgccggcgcttgtggagagatcaaggcagacttaggaagagggggtaaaaacttgttgaatccattggtcgcgactcaaaactttgaatataaga
376 # tgtcgaatatacttgataagcctctggaatcagctttcggcttcatctcggtccttccaggagccttctctgcttataggtacgaggctcttcaagga
377 # gaacccatggtcaaatattttgctggagagaaaatgcacaataacagcaatttctttactgcgaatatgtacctggctgaggaccgaattctatgtta
378 # cgagctggtggcaaagaagggcagcaaatgggttctccaatacgtaaagaactccacaggagaaacagatgttccgacagaagtgcctgacttcatct
379 # cgcaacgtcggagatggcttaacggtagtctcttcgctgctgtttacaccgtggtccatttctggaaaatctggcaatccggccacgggtttgttcga
380 # aagtgcatgctgcagatcgaagtagtctaccaggtcattagcatgatctttgcttggttcgccttgggcaacttttacttggtcttcaaaattcttgt
381 # gggctcgctgggtgatccgactttacttggaaaagcaggtttggtgctatcggtattcttcgagtggtcttatgtcatctgcctcatcgcttgcttca
382 # ttctcgccttgggcaatacgccgaaaggaacgaagaaggtctatgttggcatgaccatctattgggcaatcgtgatgacttacctcatgtttgccact
383 # gtctatctcagcgtcaaatctgtccagtcggaaatcaaagatggctttaagattggcgatttgctgacgaataagacctttgcgacacttattctctc
384 # tatgctttccacctacgtcttgtgtcaaaccctcaaatgtatcggctcatttgctaacaacacaatagggggcactaaaggcgccaacgatgcacctg
385 # gaggcggttcagtcgcctctggaaaagacggcaaagcaggtgtcgagcttccatccgatccagacgctcaatacaagaaagagctcgaagtcctcgcc
386 # gaggcacgcaaagaagaagagtcgaaaacaagcgacgaagatgtcaagaaattctactacgcttctgttcgcagctggatcgtgatggcgtggatatt
387 # cagcaacttgtcgttgatcacccttgtgatgaaagccggttcggtcgggatcattaccaagaccaagacgagtgaggaggaggcgcagcgcaagaact
388 # ctgacctttacctctacattatcttgtggagtgtagcgggactcagtgcgttcagatttgttggctcggtttggttcttgattcatagaaagtttgct
389 # gggatctga]
390 # protein sequence = [MSRYSRIVNIDLVIGESGRYDEDAPNRYSRPDAVPLQHIPSHEDFATDGQHSYMDTRDRLAAQPTYSVDNLAYSYGLR
391 # EAYESTFQNIPEHPGRQHYDSHPAEEADPAYYDDDDTRPMLDRHHSNDASSSSVTLTVQVPRWATIQYVPLFKGNLVLDCPVPSKLVNQLATGDEQPR
392 # ESTHMRYSAATCDPADFLDNRFTLRQKLYQQPRAVELFIVVTMYNEDDALLARTLIGIFQNVNYMESLRDSTMWGANAWKKIVVCIVSDGIAKINPRS
393 # AALLAGLGVFQQGIAKAKINKLETEAHIFEYTTQMEPVMRGETVSVQKGNTPVQLLFCLKQKNAQKINSHRWFFQAFGRCLEPNICVLLDAGTKPGKH
394 # SIFKLWNVFDRNRHCAGACGEIKADLGRGGKNLLNPLVATQNFEYKMSNILDKPLESAFGFISVLPGAFSAYRYEALQGEPMVKYFAGEKMHNNSNFF
395 # TANMYLAEDRILCYELVAKKGSKWVLQYVKNSTGETDVPTEVPDFISQRRRWLNGSLFAAVYTVVHFWKIWQSGHGFVRKCMLQIEVVYQVISMIFAW
396 # FALGNFYLVFKILVGSLGDPTLLGKAGLVLSVFFEWSYVICLIACFILALGNTPKGTKKVYVGMTIYWAIVMTYLMFATVYLSVKSVQSEIKDGFKIG
397 # DLLTNKTFATLILSMLSTYVLCQTLKCIGSFANNTIGGTKGANDAPGGGSVASGKDGKAGVELPSDPDAQYKKELEVLAEARKEEESKTSDEDVKKFY
398 # YASVRSWIVMAWIFSNLSLITLVMKAGSVGIITKTKTSEEEAQRKNSDLYLYIILWSVAGLSAFRFVGSVWFLIHRKFAGI]
399 scaffold14 AUGUSTUS transcript 34994 38214 0.17 - . ID=g11.t2;Parent=g11
400 scaffold14 AUGUSTUS stop_codon 34994 34996 . - 0 Parent=g11.t2
401 scaffold14 AUGUSTUS intron 35009 35061 1 - . Parent=g11.t2
402 scaffold14 AUGUSTUS intron 35522 35657 0.87 - . Parent=g11.t2
403 scaffold14 AUGUSTUS intron 35799 35851 1 - . Parent=g11.t2
404 scaffold14 AUGUSTUS intron 36061 36125 1 - . Parent=g11.t2
405 scaffold14 AUGUSTUS intron 36290 36340 1 - . Parent=g11.t2
406 scaffold14 AUGUSTUS intron 36978 37202 0.99 - . Parent=g11.t2
407 scaffold14 AUGUSTUS intron 37920 37965 0.89 - . Parent=g11.t2
408 scaffold14 AUGUSTUS intron 38118 38192 0.26 - . Parent=g11.t2
409 scaffold14 AUGUSTUS CDS 34994 35008 1 - 0 ID=g11.t2.cds;Parent=g11.t2
410 scaffold14 AUGUSTUS CDS 35062 35521 1 - 1 ID=g11.t2.cds;Parent=g11.t2
411 scaffold14 AUGUSTUS CDS 35658 35798 0.87 - 1 ID=g11.t2.cds;Parent=g11.t2
412 scaffold14 AUGUSTUS CDS 35852 36060 1 - 0 ID=g11.t2.cds;Parent=g11.t2
413 scaffold14 AUGUSTUS CDS 36126 36289 1 - 2 ID=g11.t2.cds;Parent=g11.t2
414 scaffold14 AUGUSTUS CDS 36341 36977 0.88 - 0 ID=g11.t2.cds;Parent=g11.t2
415 scaffold14 AUGUSTUS CDS 37203 37919 0.89 - 0 ID=g11.t2.cds;Parent=g11.t2
416 scaffold14 AUGUSTUS CDS 37966 38117 0.25 - 2 ID=g11.t2.cds;Parent=g11.t2
417 scaffold14 AUGUSTUS CDS 38193 38214 0.96 - 0 ID=g11.t2.cds;Parent=g11.t2
418 scaffold14 AUGUSTUS start_codon 38212 38214 . - 0 Parent=g11.t2
419 # coding sequence = [atgtctagatactctcgcattggagagagcggccgctacgatgaagacgctcctaaccgctacagtcggcctgatgcgg
420 # tgccgcttcaacatattcccagtcatgaggactttgctacggatggacaacattcctacatggatacccgggatcgactcgccgcccagccgacctac
421 # tccgttgataatctagcttactcttatggacttagagaagcatacgagtcaacattccagaacatcccagagcatccgggccgccagcattatgattc
422 # acatccagctgaagaagcagatccagcgtattatgacgatgatgataccagaccaatgctagatcgtcaccacagtaacgatgccagtagttcttcgg
423 # tgacactgacagtgcaggtcccgagatgggccaccatccagtatgtcccattgttcaaaggcaacctggttttggactgtccagtcccatcaaaattg
424 # gtcaatcagttggcgacaggggatgaacagcctcgtgaatctacgcacatgagatattcagcagcaacttgcgatcccgccgattttcttgacaaccg
425 # attcacattgcgccaaaaattatatcaacaaccgagagcagttgaactcttcatcgttgtcacaatgtacaatgaagacgatgcgctgctggcgagaa
426 # cattgatagggattttccagaatgtcaattacatggaaagtttgagggatagcacgatgtggggtgctaacgcctggaagaagatagtagtgtgcatc
427 # gttagtgacggaatcgcgaagatcaatccccgttctgcagcacttcttgctggtctgggtgtctttcagcaaggcattgccaaagctaagatcaacaa
428 # actcgagaccgaggcccatatattcgagtacacaacgcaaatggaaccagtaatgagaggcgagacagtctccgtccagaagggcaacactccggttc
429 # aactgctcttctgcttgaagcaaaagaatgcgcagaagatcaattcgcatcgctggttctttcaagcctttggcagatgtctcgagcctaatatttgt
430 # gtactgctcgatgctggaaccaaacctggtaagcactcgatattcaaactttggaacgttttcgatcgaaacagacattgtgccggcgcttgtggaga
431 # gatcaaggcagacttaggaagagggggtaaaaacttgttgaatccattggtcgcgactcaaaactttgaatataagatgtcgaatatacttgataagc
432 # ctctggaatcagctttcggcttcatctcggtccttccaggagccttctctgcttataggtacgaggctcttcaaggagaacccatggtcaaatatttt
433 # gctggagagaaaatgcacaataacagcaatttctttactgcgaatatgtacctggctgaggaccgaattctatgttacgagctggtggcaaagaaggg
434 # cagcaaatgggttctccaatacgtaaagaactccacaggagaaacagatgttccgacagaagtgcctgacttcatctcgcaacgtcggagatggctta
435 # acggtagtctcttcgctgctgtttacaccgtggtccatttctggaaaatctggcaatccggccacgggtttgttcgaaagtgcatgctgcagatcgaa
436 # gtagtctaccaggtcattagcatgatctttgcttggttcgccttgggcaacttttacttggtcttcaaaattcttgtgggctcgctgggtgatccgac
437 # tttacttggaaaagcaggtttggtgctatcggtattcttcgagtggtcttatgtcatctgcctcatcgcttgcttcattctcgccttgggcaatacgc
438 # cgaaaggaacgaagaaggtctatgttggcatgaccatctattgggcaatcgtgatgacttacctcatgtttgccactgtctatctcagcgtcaaatct
439 # gtccagtcggaaatcaaagatggctttaagattggcgatttgctgacgaataagacctttgcgacacttattctctctatgctttccacctacgtctt
440 # gtgtcaaaccctcaaatgtatcggctcatttgctaacaacacaatagggggcactaaaggcgccaacgatgcacctggaggcggttcagtcgcctctg
441 # gaaaagacggcaaagcaggtgtcgagcttccatccgatccagacgctcaatacaagaaagagctcgaagtcctcgccgaggcacgcaaagaagaagag
442 # tcgaaaacaagcgacgaagatgtcaagaaattctactacgcttctgttcgcagctggatcgtgatggcgtggatattcagcaacttgtcgttgatcac
443 # ccttgtgatgaaagccggttcggtcgggatcattaccaagaccaagacgagtgaggaggaggcgcagcgcaagaactctgacctttacctctacatta
444 # tcttgtggagtgtagcgggactcagtgcgttcagatttgttggctcggtttggttcttgattcatagaaagtttgctgggatctga]
445 # protein sequence = [MSRYSRIGESGRYDEDAPNRYSRPDAVPLQHIPSHEDFATDGQHSYMDTRDRLAAQPTYSVDNLAYSYGLREAYESTF
446 # QNIPEHPGRQHYDSHPAEEADPAYYDDDDTRPMLDRHHSNDASSSSVTLTVQVPRWATIQYVPLFKGNLVLDCPVPSKLVNQLATGDEQPRESTHMRY
447 # SAATCDPADFLDNRFTLRQKLYQQPRAVELFIVVTMYNEDDALLARTLIGIFQNVNYMESLRDSTMWGANAWKKIVVCIVSDGIAKINPRSAALLAGL
448 # GVFQQGIAKAKINKLETEAHIFEYTTQMEPVMRGETVSVQKGNTPVQLLFCLKQKNAQKINSHRWFFQAFGRCLEPNICVLLDAGTKPGKHSIFKLWN
449 # VFDRNRHCAGACGEIKADLGRGGKNLLNPLVATQNFEYKMSNILDKPLESAFGFISVLPGAFSAYRYEALQGEPMVKYFAGEKMHNNSNFFTANMYLA
450 # EDRILCYELVAKKGSKWVLQYVKNSTGETDVPTEVPDFISQRRRWLNGSLFAAVYTVVHFWKIWQSGHGFVRKCMLQIEVVYQVISMIFAWFALGNFY
451 # LVFKILVGSLGDPTLLGKAGLVLSVFFEWSYVICLIACFILALGNTPKGTKKVYVGMTIYWAIVMTYLMFATVYLSVKSVQSEIKDGFKIGDLLTNKT
452 # FATLILSMLSTYVLCQTLKCIGSFANNTIGGTKGANDAPGGGSVASGKDGKAGVELPSDPDAQYKKELEVLAEARKEEESKTSDEDVKKFYYASVRSW
453 # IVMAWIFSNLSLITLVMKAGSVGIITKTKTSEEEAQRKNSDLYLYIILWSVAGLSAFRFVGSVWFLIHRKFAGI]