Mercurial > repos > iracooke > protk_proteogenomics
comparison tool-data/pepxml_databases.loc.sample @ 0:956bfab63005 draft default tip
planemo upload for repository https://github.com/iracooke/protk-galaxytools/blob/master/protk-proteogenomics/.shed.yml commit 24e0fef2496984648a8a5cd5bff4d6b9b634a302-dirty
| author | iracooke |
|---|---|
| date | Tue, 20 Oct 2015 20:36:03 -0400 |
| parents | |
| children |
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| -1:000000000000 | 0:956bfab63005 |
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| 1 #This file lists the names of protein databases installed locally in protk. | |
| 2 # These are used by omssa and x!tandem as well as the "mascot to pepxml" tool | |
| 3 # In order to combine search results with Interprophet searches must be run against an identical database | |
| 4 # | |
| 5 # Entries should follow the be structured as follows | |
| 6 # Display_name omssa_tandem_dbname dbkey | |
| 7 # | |
| 8 # | |
| 9 Swissprot spall_ spall spall_ | |
| 10 Combined PlasmboDB (falciparum) and Swissprot Human plasmodb_pfalciparum_sphuman_ plasmodb_pfalciparum_sphuman plasmodb_pfalciparum_sphuman_ | |
| 11 Swissprot Human sphuman_ sphuman sphuman_ | |
| 12 Combined Swissprot/TRembl Human sptrhuman_ sptrhuman sptrhuman_ | |
| 13 Swissprot Mouse spmouse_ spmouse spmouse_ |