Mercurial > repos > iracooke > proteomics_datatypes
comparison datatypes_conf.xml @ 1:4198976f4e5e draft
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author | iracooke |
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date | Mon, 10 Mar 2014 19:38:57 -0400 |
parents | 7101f7e4b00b |
children | a1b29f86bdbf |
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0:7101f7e4b00b | 1:4198976f4e5e |
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1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
2 <datatypes> | 2 <datatypes> |
3 <datatype_files> | 3 <datatype_files> |
4 <datatype_file name="proteomics.py"/> | 4 <datatype_file name="proteomics.py"/> |
5 </datatype_files> | 5 </datatype_files> |
6 <registration display_path="display_applications"> | 6 <registration display_path="display_applications"> |
7 <datatype extension="prot_gff" type="galaxy.datatypes.proteomics:ProtGff" mimetype="application/xml" display_in_upload="true"> | |
8 <display file="proteomics/ProtGff.xml" /> | |
9 </datatype> | |
10 <datatype extension="pepxml" type="galaxy.datatypes.proteomics:PepXml" mimetype="application/xml" display_in_upload="true"> | 7 <datatype extension="pepxml" type="galaxy.datatypes.proteomics:PepXml" mimetype="application/xml" display_in_upload="true"> |
11 <display file="proteomics/PepXml.xml" /> | 8 <display file="proteomics/PepXml.xml" /> |
12 </datatype> | 9 </datatype> |
13 <datatype extension="raw_pepxml" type="galaxy.datatypes.proteomics:PepXml" subclass="true"> | 10 <datatype extension="raw_pepxml" type="galaxy.datatypes.proteomics:PepXml" mimetype="application/xml" subclass="true"> |
14 <display file="proteomics/PepXml.xml" /> | 11 <display file="proteomics/PepXml.xml" /> |
15 </datatype> | 12 </datatype> |
16 <datatype extension="peptideprophet_pepxml" type="galaxy.datatypes.proteomics:PepXml" subclass="true"> | 13 <datatype extension="peptideprophet_pepxml" type="galaxy.datatypes.proteomics:PepXml" mimetype="application/xml" subclass="true"> |
17 <display file="proteomics/PepXml.xml" /> | 14 <display file="proteomics/PepXml.xml" /> |
18 </datatype> | 15 </datatype> |
19 <datatype extension="interprophet_pepxml" type="galaxy.datatypes.proteomics:PepXml" subclass="true"> | 16 <datatype extension="interprophet_pepxml" type="galaxy.datatypes.proteomics:PepXml" mimetype="application/xml" subclass="true"> |
20 <display file="proteomics/PepXml.xml" /> | 17 <display file="proteomics/PepXml.xml" /> |
21 </datatype> | 18 </datatype> |
22 <datatype extension="protxml" type="galaxy.datatypes.proteomics:ProtXML" display_in_upload="true" > | 19 <datatype extension="protxml" type="galaxy.datatypes.proteomics:ProtXML" mimetype="application/xml" display_in_upload="true" > |
23 <display file="proteomics/ProtXml.xml"/> | 20 <display file="proteomics/ProtXml.xml"/> |
24 </datatype> | 21 </datatype> |
22 <datatype extension="pepxml.tsv" type="galaxy.datatypes.proteomics:PepXmlReport" display_in_upload="true" /> | |
23 <datatype extension="protxml.tsv" type="galaxy.datatypes.proteomics:ProtXmlReport" display_in_upload="true" /> | |
25 <datatype extension="mascotdat" type="galaxy.datatypes.proteomics:MascotDat" display_in_upload="false" /> | 24 <datatype extension="mascotdat" type="galaxy.datatypes.proteomics:MascotDat" display_in_upload="false" /> |
26 <datatype extension="mzml" type="galaxy.datatypes.proteomics:MzML" mimetype="application/xml" display_in_upload="true"> | 25 <datatype extension="mzml" type="galaxy.datatypes.proteomics:MzML" mimetype="application/xml" display_in_upload="true"> |
27 <display file="proteomics/mzML.xml"/> | 26 <display file="proteomics/mzML.xml"/> |
27 <display file="proteomics/protvis_mzml.xml"/> | |
28 </datatype> | 28 </datatype> |
29 <datatype extension="mgf" type="galaxy.datatypes.proteomics:Mgf" display_in_upload="true" /> | 29 <datatype extension="mgf" type="galaxy.datatypes.proteomics:Mgf" display_in_upload="true" /> |
30 <datatype extension="xls" type="galaxy.datatypes.proteomics:Xls" display_in_upload="true" /> | 30 <datatype extension="idpdb" type="galaxy.datatypes.proteomics:IdpDB" display_in_upload="true" /> |
31 <datatype extension="wiff" type="galaxy.datatypes.proteomics:Wiff" display_in_upload="true" /> | |
31 <datatype extension="mzxml" type="galaxy.datatypes.proteomics:MzXML" mimetype="application/xml" display_in_upload="true" /> | 32 <datatype extension="mzxml" type="galaxy.datatypes.proteomics:MzXML" mimetype="application/xml" display_in_upload="true" /> |
32 <datatype extension="mzq" type="galaxy.datatypes.proteomics:MzQuantML" mimetype="application/xml" display_in_upload="true" /> | 33 <datatype extension="mzq" type="galaxy.datatypes.proteomics:MzQuantML" mimetype="application/xml" display_in_upload="true" /> |
33 <datatype extension="mzid" type="galaxy.datatypes.proteomics:MzIdentML" mimetype="application/xml" display_in_upload="true" /> | 34 <datatype extension="mzid" type="galaxy.datatypes.proteomics:MzIdentML" mimetype="application/xml" display_in_upload="true" /> |
34 <datatype extension="traML" type="galaxy.datatypes.proteomics:TraML" mimetype="application/xml" display_in_upload="true" /> | 35 <datatype extension="traml" type="galaxy.datatypes.proteomics:TraML" mimetype="application/xml" display_in_upload="true" /> |
35 <datatype extension="raw" type="galaxy.datatypes.proteomics:RAW" display_in_upload="true" /> | 36 <datatype extension="featurexml" type="galaxy.datatypes.proteomics:FeatureXML" mimetype="application/xml" display_in_upload="true" /> |
37 <datatype extension="consensusxml" type="galaxy.datatypes.proteomics:ConsensusXML" mimetype="application/xml" display_in_upload="true" /> | |
38 <datatype extension="idxml" type="galaxy.datatypes.proteomics:IdXML" mimetype="application/xml" display_in_upload="true" /> | |
39 <datatype extension="raw" type="galaxy.datatypes.proteomics:RAW" mimetype="application/octet-stream" display_in_upload="true" /> | |
36 <datatype extension="msp" type="galaxy.datatypes.proteomics:Msp" display_in_upload="true" /> | 40 <datatype extension="msp" type="galaxy.datatypes.proteomics:Msp" display_in_upload="true" /> |
37 <datatype extension="ms2" type="galaxy.datatypes.proteomics:Ms2" display_in_upload="true" /> | 41 <datatype extension="ms2" type="galaxy.datatypes.proteomics:Ms2" display_in_upload="true" /> |
38 <datatype extension="hlf" type="galaxy.datatypes.proteomics:XHunterAslFormat" display_in_upload="true" /> | 42 <datatype extension="hlf" type="galaxy.datatypes.proteomics:XHunterAslFormat" mimetype="application/octet-stream" display_in_upload="true" /> |
39 </registration> | 43 </registration> |
40 <sniffers> | 44 <sniffers> |
41 <sniffer type="galaxy.datatypes.proteomics:ProtGff"/> | 45 <sniffer type="galaxy.datatypes.proteomics:ProtGff"/> |
42 <sniffer type="galaxy.datatypes.proteomics:MzML"/> | 46 <sniffer type="galaxy.datatypes.proteomics:MzML"/> |
43 <sniffer type="galaxy.datatypes.proteomics:PepXml"/> | 47 <sniffer type="galaxy.datatypes.proteomics:PepXml"/> |
44 <sniffer type="galaxy.datatypes.proteomics:Mgf"/> | 48 <sniffer type="galaxy.datatypes.proteomics:Mgf"/> |
45 <sniffer type="galaxy.datatypes.proteomics:ProtXML"/> | 49 <sniffer type="galaxy.datatypes.proteomics:ProtXML"/> |
46 <sniffer type="galaxy.datatypes.proteomics:MzXML"/> | 50 <sniffer type="galaxy.datatypes.proteomics:MzXML"/> |
47 <sniffer type="galaxy.datatypes.proteomics:TraML"/> | 51 <sniffer type="galaxy.datatypes.proteomics:TraML"/> |
48 <sniffer type="galaxy.datatypes.proteomics:MzIdentML"/> | 52 <sniffer type="galaxy.datatypes.proteomics:MzIdentML"/> |
49 <sniffer type="galaxy.datatypes.proteomics:MzQuantML"/> | 53 <sniffer type="galaxy.datatypes.proteomics:MzQuantML"/> |
50 <sniffer type="galaxy.datatypes.proteomics:Xls"/> | |
51 </sniffers> | 54 </sniffers> |
52 </datatypes> | 55 </datatypes> |