# HG changeset patch
# User iracooke
# Date 1395188997 14400
# Node ID af52f95e857e40ee978f2fb6717fe5b5ae565de6
Uploaded
diff -r 000000000000 -r af52f95e857e README.md
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+# Create protein database from gff3 including encoding genome coordinates into the fasta header
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diff -r 000000000000 -r af52f95e857e proteindb_from_gff3.xml
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+ protk
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+ Extract proteins from gff3 and encode genomic coordinates in the fasta header
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+ augustus_to_proteindb.rb $fasta_file -o $output $coords
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+**What it does**
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+Extract proteins from gff3 and encode genomic coordinates in the fasta header.
+Currently this only works with gff3 generated using the Augustus gene finder
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+----
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+**References**
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diff -r 000000000000 -r af52f95e857e repository_dependencies.xml
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diff -r 000000000000 -r af52f95e857e tool_dependencies.xml
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