Mercurial > repos > iracooke > omssa

comparison tool_dependencies.xml @ 6:42b0c5c270f9

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Dependency tweaks
author Ira Cooke <iracooke@gmail.com>
date Mon, 28 Oct 2013 13:13:59 +1100
parents 3aafd0a91830
children 29923c1cfd7b
comparison
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5:3aafd0a91830 6:42b0c5c270f9
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="omssa" version="2.1.9"> 3
4 <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_omssa_2_1_9" owner="iracooke" changeset_revision="a71ce3af685a"/> 4 <package name="protk" version="1.2.5">
5 </package> 5 <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_protk_1_2_5" owner="iracooke" changeset_revision="1a4cb535ed4c"/>
6
7 <package name="protk" version="1.2.4">
8 <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_protk_1_2_4" owner="bgruening" changeset_revision="e129907310c2"/>
9 </package> 6 </package>
10 7
11 <package name="blast+" version="2.2.27"> 8 <package name="blast+" version="2.2.27">
12 <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_blast_plus_2_2_27" owner="iuc" changeset_revision="eab09bc4d63e"/> 9 <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_blast_plus_2_2_27" owner="iuc" changeset_revision="eab09bc4d63e" prior_installation_required="True"/>
13 </package> 10 </package>
14 11
12 <package name="omssa" version="2.1.9">
13 <repository toolshed="http://testtoolshed.g2.bx.psu.edu" name="package_omssa_2_1_9" owner="iracooke" changeset_revision="a71ce3af685a"/>
14 <install version="1.0">
15 <actions>
16 <action type="set_environment">
17 <environment_variable name="PROTK_BLAST_ROOT" action="set_to">FROMPATH</environment_variable>
18 </action>
19 </actions>
20 </install>
21 <readme>
22 Sets environment variables for OMSSA
23 </readme>
24 </package>
15 </tool_dependency> 25 </tool_dependency>