Mercurial > repos > iracooke > mascot
comparison tool-data/pepxml_databases.loc.sample @ 7:0ae7738e33e9 draft
Uploaded
| author | simonalpha |
|---|---|
| date | Mon, 05 Jan 2015 17:01:18 -0500 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| 6:0a6a56b988d5 | 7:0ae7738e33e9 |
|---|---|
| 1 #This file lists the names of protein databases installed locally in protk. | |
| 2 # These are used by omssa and x!tandem as well as the "mascot to pepxml" tool | |
| 3 # In order to combine search results with Interprophet searches must be run against an identical database | |
| 4 # | |
| 5 # Entries should follow the be structured as follows | |
| 6 # Display_name omssa_tandem_dbname dbkey | |
| 7 # | |
| 8 # | |
| 9 Swissprot spall_ SwissProt spall_ | |
| 10 Combined PlasmboDB (falciparum) and Swissprot Human plasmodb_pfalciparum_sphuman_ plasmodb_pfalciparum_sphuman plasmodb_pfalciparum_sphuman_ | |
| 11 Swissprot Human sphuman_ sphuman sphuman_ | |
| 12 Combined Swissprot/TRembl Human sptrhuman_ sptrhuman sptrhuman_ | |
| 13 Swissprot Mouse spmouse_ spmouse spmouse_ |