--- a/permutate_axis.xml	Wed Dec 18 09:58:57 2019 +0000
+++ b/permutate_axis.xml	Wed Dec 17 15:34:17 2025 +0000
@@ -1,5 +1,11 @@
-<tool id="ip_permutate_axis" name="Permutate image" version="0.2"> 
-    <description>along an axis</description>
+<tool id="ip_permutate_axis" name="Permutate image axes" version="0.2-2">
+    <description></description>
+    <edam_operations>
+        <edam_operation>operation_3443</edam_operation>
+    </edam_operations>
+    <xrefs>
+        <xref type="bio.tools">galaxy_image_analysis</xref>
+    </xrefs>
     <requirements>
         <requirement type="package" version="0.14.2">scikit-image</requirement>
         <requirement type="package" version="1.15.4">numpy</requirement>
@@ -9,7 +15,7 @@
     <![CDATA[
     python '$__tool_directory__/permutate_axis.py' '$input' '$output' $permutate --axis $axis
     ]]>
-    </command> 
+    </command>
     <inputs>
         <param name="input" type="data" format="tiff" label="Binary Image File"/>
         <param name="permutate" type="text" value="0,1,2" label="new channel order">
@@ -22,8 +28,8 @@
     </outputs>
     <tests>
         <test>
-            <param name="input" value="galaxyIcon_noText.tif"/>
-            <output name="output" file="res.tif" ftype="tiff" compare="sim_size"/>
+            <param name="input" value="galaxyIcon_noText.tiff"/>
+            <output name="output" file="res.tiff" ftype="tiff" compare="sim_size"/>
         </test>
     </tests>
     <help>
@@ -32,6 +38,6 @@
     Permutates the image along a specified axis.
     </help>
     <citations>
-        <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation> 
+        <citation type="doi">10.1016/j.jbiotec.2017.07.019</citation>
     </citations>
 </tool>