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comparison permutate_axis.xml @ 1:64de33b5137e draft

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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/permutate_axis/ commit b2acc1845a25828181597fe5b6982fe116a7796d
author imgteam
date Mon, 22 Jul 2019 04:58:26 -0400
parents d5ab37450c44
children
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0:d5ab37450c44 1:64de33b5137e
1 <tool id="ip_permutate_axis" name="Permutate image" version="0.1"> 1 <tool id="ip_permutate_axis" name="Permutate image" version="0.2">
2 <description>along an axis</description> 2 <description>along an axis</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.14.2">scikit-image</requirement> 4 <requirement type="package" version="0.14.2">scikit-image</requirement>
5 <requirement type="package" version="1.15.4">numpy</requirement> 5 <requirement type="package" version="1.15.4">numpy</requirement>
6 <requirement type="package" version="0.15.1">tifffile</requirement>
6 </requirements> 7 </requirements>
7 <command> 8 <command detect_errors="aggressive">
8 <![CDATA[ 9 <![CDATA[
9 python '$__tool_directory__/permutate_axis.py' '$input' '$output' $permutate --axis $axis 10 python '$__tool_directory__/permutate_axis.py' '$input' '$output' $permutate --axis $axis
10 ]]> 11 ]]>
11 </command> 12 </command>
12 <inputs> 13 <inputs>
13 <param name="input" type="data" format="tiff" label="Binary Image File"/> 14 <param name="input" type="data" format="tiff" label="Binary Image File"/>
14 <param name="permutate" type="text" value="0,1,2" label="new channel order"> 15 <param name="permutate" type="text" value="0,1,2" label="new channel order">
15 <validator type="regex" message="Input has to be a sequence of axis, separated by commas">([0-4],)+[0-4]</validator> 16 <validator type="regex" message="Input has to be a sequence of axis, separated by commas">([0-4],)+[0-4]</validator>
16 </param> 17 </param>