Mercurial > repos > imgteam > overlay_moving_and_fixed_image

comparison overlay_moving_and_fixed_image.xml @ 1:f9df2b32b632 draft

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"planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/overlay_moving_and_fixed_image/ commit 3d389fdec0db29cf6fbd783c0501455bf624fa90"
author imgteam
date Wed, 18 Dec 2019 09:58:34 +0000
parents 5cda6b23a47e
children 93533276bf1d
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0:5cda6b23a47e 1:f9df2b32b632
1 <tool id="ip_viz_overlay_moving_and_fixed_image" name="Overlay" version="0.0.1"> 1 <tool id="ip_viz_overlay_moving_and_fixed_image" name="Overlay" version="0.0.2">
2 <description>moving and fixed image</description> 2 <description>moving and fixed image</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.14.2">scikit-image</requirement> 4 <requirement type="package" version="0.14.2">scikit-image</requirement>
5 <requirement type="package" version="0.23.4">pandas</requirement> 5 <requirement type="package" version="0.23.4">pandas</requirement>
6 <requirement type="package" version="1.15.4">numpy</requirement> 6 <requirement type="package" version="1.15.4">numpy</requirement>
7 <requirement type="package" version="1.1.0">scipy</requirement> 7 <requirement type="package" version="1.1.0">scipy</requirement>
8 <requirement type="package" version="5.3.0">pillow</requirement> 8 <requirement type="package" version="5.3.0">pillow</requirement>
9 <requirement type="package" version="0.15.1">tifffile</requirement>
9 </requirements> 10 </requirements>
10 <command><![CDATA[ 11 <command detect_errors="aggressive"><![CDATA[
11 python '$__tool_directory__/overlay_moving_and_fixed_image.py' 12 python '$__tool_directory__/overlay_moving_and_fixed_image.py'
12 '$fixed_image' 13 '$fixed_image'
13 '$moving_image' 14 '$moving_image'
14 '$warp_matrix' 15 '$warp_matrix'
15 '$overlay_out' 16 '$overlay_out'
16 --factor $factor 17 --factor $factor
17 $inverse_transform 18 $inverse_transform
18 ]]></command> 19 ]]></command>