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comparison color-deconvolution.xml @ 1:29110ca1b63a draft

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planemo upload for repository https://github.com/BMCV/galaxy-image-analysis/tools/color-deconvolution/ commit b2acc1845a25828181597fe5b6982fe116a7796d
author imgteam
date Mon, 22 Jul 2019 04:55:58 -0400
parents 85a9449d1dea
children
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0:85a9449d1dea 1:29110ca1b63a
1 <tool id="ip_color_deconvolution" name="Color Deconvolution" version="0.7"> 1 <tool id="ip_color_deconvolution" name="Color Deconvolution" version="0.8">
2 <description>Color deconvolution</description> 2 <description>Color deconvolution</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="0.14.2">scikit-image</requirement> 4 <requirement type="package" version="0.14.2">scikit-image</requirement>
5 <requirement type="package" version="4.0.0">pillow</requirement> 5 <requirement type="package" version="4.0.0">pillow</requirement>
6 <requirement type="package" version="0.18.1">scikit-learn</requirement> 6 <requirement type="package" version="0.18.1">scikit-learn</requirement>
7 <requirement type="package" version="1.12">numpy</requirement> 7 <requirement type="package" version="1.12">numpy</requirement>
8 <requirement type="package" version="0.15.1">tifffile</requirement>
8 </requirements> 9 </requirements>
9 <command> 10 <command detect_errors="aggressive">
10 <![CDATA[ 11 <![CDATA[
11 python '$__tool_directory__/color_deconvolution.py' '$input' '$output' '$convtype' 12 python '$__tool_directory__/color_deconvolution.py' '$input' '$output' '$convtype'
12 ]]> 13 ]]>
13 </command> 14 </command>
14 <inputs> 15 <inputs>
15 <param name="input" type="data" format="tiff,png,jpg,bmp" label="Image file with 3 channels"/> 16 <param name="input" type="data" format="tiff,png,jpg,bmp" label="Image file with 3 channels"/>