comparison yolo.xml @ 24:f191e0b8fa1d draft

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author greg
date Thu, 19 Oct 2017 10:07:46 -0400
parents 53a9c312fe7a
children f8b16e55b18c
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23:53a9c312fe7a 24:f191e0b8fa1d
10 cp -R /home/greg/_conda/envs/__darknet@1.0/bin/* . 10 cp -R /home/greg/_conda/envs/__darknet@1.0/bin/* .
11 #set input $input_type_cond.input 11 #set input $input_type_cond.input
12 #if str($input_type_cond.input_type) == 'image': 12 #if str($input_type_cond.input_type) == 'image':
13 #set input_filename = $input.file_name 13 #set input_filename = $input.file_name
14 #set full_name = $input.name 14 #set full_name = $input.name
15 #set head = $full_name.split('.')[0]
16 #set output_filename_png = '%s_predictions.png' % $head
17 #set output_filename_shape_confidence = '%s_shape_detection_confidence.tabular' % $head
18 && ln -s $input_filename input_dir/$full_name 15 && ln -s $input_filename input_dir/$full_name
19 && darknet detect cfg/yolo.cfg yolo.weights 'input_dir/$full_name' -thresh $thresh > output_shape_confidence_dir/$output_filename_shape_confidence 16 && darknet detect cfg/yolo.cfg yolo.weights 'input_dir/$full_name' -thresh $thresh > $output_shape_confidence
20 && mv ./predictions.png output_png_dir/$output_filename_png 17 && mv ./predictions.png $output_shape
21 #else: 18 #else:
22 #for $i in $input: 19 #for $i in $input:
23 #set input_filename = $i.file_name 20 #set input_filename = $i.file_name
24 #set full_name = $i.name 21 #set full_name = $i.name
25 #set head = $full_name.split('.')[0] 22 #set head = $full_name.split('.')[0]
43 <when value="images"> 40 <when value="images">
44 <param name="input" format="jpg" type="data_collection" collection_type="list" label="Collection of image files"/> 41 <param name="input" format="jpg" type="data_collection" collection_type="list" label="Collection of image files"/>
45 </when> 42 </when>
46 </conditional> 43 </conditional>
47 <param name="thresh" type="float" value="0.25" label="Object detection threshold"/> 44 <param name="thresh" type="float" value="0.25" label="Object detection threshold"/>
48 <param name="output_shape_confidence" type="select" display="radio" label="Output shape detection confidence levels?"> 45 <param name="output_shape_confidence_log" type="select" display="radio" label="Output shape detection confidence levels?">
49 <option value="yes" selected="true">Yes</option> 46 <option value="yes" selected="true">Yes</option>
50 <option value="no">No</option> 47 <option value="no">No</option>
51 </param> 48 </param>
52 </inputs> 49 </inputs>
53 <outputs> 50 <outputs>
54 <data name="output_shape_confidence" format="tabular" label="${tool.name} (shape detection confidence) on ${on_string}"> 51 <data name="output_shape_confidence" format="tabular" label="${tool.name} (shape detection confidence) on ${on_string}">
55 <filter>input_type_cond['input_type'] == 'image' and output_shape_confidence == 'yes'</filter> 52 <filter>input_type_cond['input_type'] == 'image' and output_shape_confidence_log == 'yes'</filter>
56 </data> 53 </data>
57 <data name="output_shape" format="png" label="${tool.name} (shapes) on ${on_string}"> 54 <data name="output_shape" format="png" label="${tool.name} (shapes) on ${on_string}">
58 <filter>input_type_cond['input_type'] == 'image'</filter> 55 <filter>input_type_cond['input_type'] == 'image'</filter>
59 </data> 56 </data>
60 <collection name="output_shape_confidences" type="list" label="${tool.name} (shape detection confidence) on ${on_string}"> 57 <collection name="output_shape_confidences" type="list" label="${tool.name} (shape detection confidence) on ${on_string}">
61 <discover_datasets pattern="__name__" directory="output_shape_confidence_dir" format="tabular" /> 58 <discover_datasets pattern="__name__" directory="output_shape_confidence_dir" format="tabular" />
62 <filter>input_type_cond['input_type'] == 'images' and output_shape_confidence == 'yes'</filter> 59 <filter>input_type_cond['input_type'] == 'images' and output_shape_confidence_log == 'yes'</filter>
63 </collection> 60 </collection>
64 <collection name="output_shapes" type="list" label="${tool.name} (shapes) on ${on_string}"> 61 <collection name="output_shapes" type="list" label="${tool.name} (shapes) on ${on_string}">
65 <discover_datasets pattern="__name__" directory="output_png_dir" format="png" /> 62 <discover_datasets pattern="__name__" directory="output_png_dir" format="png" />
66 <filter>input_type_cond['input_type'] == 'images'</filter> 63 <filter>input_type_cond['input_type'] == 'images'</filter>
67 </collection> 64 </collection>