Mercurial > repos > greg > validate_affy_metadata

comparison validate_affy_metadata.xml @ 10:bdfd9b8d32f1 draft

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author greg
date Thu, 15 Nov 2018 10:21:52 -0500
parents ae030e6e838c
children df9d19f771ae
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9:d15ae203013e 10:bdfd9b8d32f1
4 python '$__tool_directory__/validate_affy_metadata.py' 4 python '$__tool_directory__/validate_affy_metadata.py'
5 --input '$input' 5 --input '$input'
6 --output '$output']]></command> 6 --output '$output']]></command>
7 <inputs> 7 <inputs>
8 <param name="input" type="data" format="csv" label="Affymetrix 96 well plate metadata file"> 8 <param name="input" type="data" format="csv" label="Affymetrix 96 well plate metadata file">
9 <validator type="expression" message="96 well plate data must have 31 columns and no more than 96 lines of data"><![CDATA[value is not None and value.metadata.columns==31 and value.metadata.data_lines<=96]]></validator> 9 <validator type="expression" message="96 well plate data must have 29 columns and no more than 96 lines of data"><![CDATA[value is not None and value.metadata.columns==29 and value.metadata.data_lines<=96]]></validator>
10 </param> 10 </param>
11 </inputs> 11 </inputs>
12 <outputs> 12 <outputs>
13 <data name="output" format="csv"/> 13 <data name="output" format="csv"/>
14 </outputs> 14 </outputs>