# HG changeset patch
# User greg
# Date 1526998549 14400
# Node ID 82822d1e5119bc680f6790429c5051806e3e8503
# Parent  7973201f23e753a7102d8fb8bd152ee46aa8c21d
Uploaded

diff -r 7973201f23e7 -r 82822d1e5119 add_scaffold.py
--- a/add_scaffold.py	Tue May 22 10:10:15 2018 -0400
+++ b/add_scaffold.py	Tue May 22 10:15:49 2018 -0400
@@ -75,7 +75,7 @@
         cur.execute(sql)
         try:
             cur.fetchone()[0]
-            self.stop_err("The scaffold %s has already been added to the database." % scaffold_id)
+            # The scaffold has been added to the database.
             return False
         except:
             # The scaffold has not yet been added.
@@ -88,6 +88,8 @@
             self.process_orthogroup_fasta_files()
             self.fh.flush()
             self.fh.close()
+        else:
+            self.stop_err("The scaffold %s has already been added to the database." % scaffold_id)
 
     def process_annot_dir(self):
         """