comparison add_scaffold.xml @ 1:c6a05684ed31 draft

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author greg
date Tue, 22 May 2018 09:44:51 -0400
parents fdcced0f4ae4
children 38b2da3cac1e
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0:fdcced0f4ae4 1:c6a05684ed31
3 <macros> 3 <macros>
4 <import>macros.xml</import> 4 <import>macros.xml</import>
5 </macros> 5 </macros>
6 <command detect_errors="exit_code"><![CDATA[ 6 <command detect_errors="exit_code"><![CDATA[
7 python add_scaffold.py 7 python add_scaffold.py
8 --database_connection_string '$__app,config.plant_tribes_database_connection' 8 --database_connection_string '$__app__.config.plant_tribes_database_connection'
9 --output '$output' 9 --output '$output'
10 --scaffold_path '$GALAXY_DATA_INDEX_DIR/plant_tribes/scaffolds/$scaffold' 10 --scaffold_path '$GALAXY_DATA_INDEX_DIR/plant_tribes/scaffolds/$scaffold'
11 --output '$output']]></command> 11 --output '$output']]></command>
12 <inputs> 12 <inputs>
13 <expand macro="param_scaffold" /> 13 <expand macro="param_scaffold" />