Mercurial > repos > greg > phylogenomics_analysis

comparison phylogenomics_analysis.xml @ 84:f0f02b73d5fe draft

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Uploaded
author greg
date Thu, 23 Mar 2017 07:57:59 -0400
parents 7d07e0ebe8c9
children 6154253af263
comparison
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83:bcb75754f5e7 84:f0f02b73d5fe
132 </when> 132 </when>
133 </conditional> 133 </conditional>
134 </when> 134 </when>
135 <when value="ptorthocs"> 135 <when value="ptorthocs">
136 <param name="input_ptorthocs" format="ptorthocs" type="data" label="Precomputed orthologous gene family clusters with corresponding coding sequences" /> 136 <param name="input_ptorthocs" format="ptorthocs" type="data" label="Precomputed orthologous gene family clusters with corresponding coding sequences" />
137 <expand macro="param_orthogroup_fna" />
138 <expand macro="param_scaffold" /> 137 <expand macro="param_scaffold" />
139 <expand macro="param_method" /> 138 <expand macro="param_method" />
140 <conditional name="options_type_cond"> 139 <expand macro="cond_orthogroup_fna" />
141 <expand macro="param_options_type" />
142 <when value="basic" />
143 <when value="advanced">
144 <expand macro="cond_multiple_sequence_alignments" />
145 <expand macro="cond_phylogenetic_trees_ptorthocs" />
146 <expand macro="cond_remove_gappy_sequences" />
147 <expand macro="param_multiple_codon_alignments" />
148 </when>
149 </conditional>
150 </when> 140 </when>
151 </conditional> 141 </conditional>
152 </inputs> 142 </inputs>
153 <outputs> 143 <outputs>
154 <data name="output_ptortho" format="ptortho"> 144 <data name="output_ptortho" format="ptortho">